Ordering-Based Causal Structure Learning in the Presence of Latent Variables
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Abstract (arXiv)
We consider the task of learning a causal graph in the presence of latent confounders given i.i.d.~samples from the model. While current algorithms for causal structure discovery in the presence of latent confounders are constraint-based, we here propose a score-based approach. We prove that under assumptions weaker than faithfulness, any sparsest independence map (IMAP) of the distribution belongs to the Markov equivalence class of the true model. This motivates the Sparsest Poset formulation - that posets can be mapped to minimal IMAPs of the true model such that the sparsest of these IMAPs is Markov equivalent to the true model. Motivated by this result, we propose a greedy algorithm over the space of posets for causal structure discovery in the presence of latent confounders and compare its performance to the current state-of-the-art algorithms FCI and FCI+ on synthetic data.
Key facts. Cited by 26 papers in the map (data through 7 Oct 2026). First posted on arXiv 20 Oct 2019.
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Citing papers per year: 2021: 8; 2022: 4; 2023: 6; 2024: 4; 2025: 3; 2026: 1.
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- 2021A survey of Bayesian Network structure learningcited by 85
- 2021Ordering-Based Causal Discovery with Reinforcement Learningcited by 55
- 2022Causal Structure Learning: a Combinatorial Perspectivecited by 46
- 2021Integer Programming for Causal Structure Learning in the Presence of Latent Variablescited by 14
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnablecited by 13
- 2024Recursive Causal Discoverycited by 12
- 2022Novel Ordering-based Approaches for Causal Structure Learning in the Presence of Unobserved Variablescited by 10
- 2023Constraint-Free Structure Learning with Smooth Acyclic Orientationscited by 10
- 2021Deconfounded Score Method: Scoring DAGs with Dense Unobserved Confoundingcited by 9
- 2023Expert-Aided Causal Discovery of Ancestral Graphscited by 8
- 2024Scalable Differentiable Causal Discovery in the Presence of Latent Confounders with Skeleton Posterior (Extended Version)cited by 6
- 2022The Impact of Variable Ordering on Bayesian Network Structure Learningcited by 5
14 more
- 2021Causal Homotopycited by 4
- 2021Entropic Inequality Constraints from e-separation Relations in Directed Acyclic Graphs with Hidden Variablescited by 3
- 2023CMVAE: Causal Meta VAE for Unsupervised Meta-Learningcited by 3
- 2023s-ID: Causal Effect Identification in a Sub-Populationcited by 3
- 2025Score-informed Neural Operator for Enhancing Ordering-based Causal Discoverycited by 2
- 2025DAG DECORation: Continuous Optimization for Structure Learning under Hidden Confoundingcited by 2
- 2026Score-Based Causal Discovery of Latent Variable Causal Modelscited by 2
- 2021Improving Accuracy of Permutation DAG Search using Best Order Score Searchcited by 1
- 2023A Review and Roadmap of Deep Causal Model from Different Causal Structures and Representationscited by 1
- 2024QWO: Speeding Up Permutation-Based Causal Discovery in LiGAMscited by 1
- 2025Score-based Greedy Search for Structure Identification of Partially Observed Linear Causal Modelscited by 1
- 2021Identification of Latent Variables From Graphical Model Residualscited by 0
- 2022Reinforcement Causal Structure Learning on Order Graphcited by 0
- 2024Machine Learning and Data Analysis Using Posets: A Surveycited by 0
- 2026Score-Based Causal Discovery of Latent Variable Causal Models19 May 2026
- 2025Score-based Greedy Search for Structure Identification of Partially Observed Linear Causal Models5 Oct 2025
- 2025DAG DECORation: Continuous Optimization for Structure Learning under Hidden Confounding2 Oct 2025
- 2025Score-informed Neural Operator for Enhancing Ordering-based Causal Discovery18 Aug 2025
- 2024QWO: Speeding Up Permutation-Based Causal Discovery in LiGAMs30 Oct 2024
- 2024Scalable Differentiable Causal Discovery in the Presence of Latent Confounders with Skeleton Posterior (Extended Version)15 Jun 2024
- 2024Machine Learning and Data Analysis Using Posets: A Survey3 Apr 2024
- 2024Recursive Causal Discovery14 Mar 2024
- 2023A Review and Roadmap of Deep Causal Model from Different Causal Structures and Representations2 Nov 2023
- 2023Expert-Aided Causal Discovery of Ancestral Graphs21 Sep 2023
- 2023Constraint-Free Structure Learning with Smooth Acyclic Orientations15 Sep 2023
- 2023s-ID: Causal Effect Identification in a Sub-Population5 Sep 2023
14 more
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnable9 Mar 2023
- 2023CMVAE: Causal Meta VAE for Unsupervised Meta-Learning20 Feb 2023
- 2022Reinforcement Causal Structure Learning on Order Graph22 Nov 2022
- 2022Novel Ordering-based Approaches for Causal Structure Learning in the Presence of Unobserved Variables14 Aug 2022
- 2022The Impact of Variable Ordering on Bayesian Network Structure Learning17 Jun 2022
- 2022Causal Structure Learning: a Combinatorial Perspective2 Jun 2022
- 2021A survey of Bayesian Network structure learning23 Sep 2021
- 2021Causal Homotopy20 Sep 2021
- 2021Improving Accuracy of Permutation DAG Search using Best Order Score Search17 Aug 2021
- 2021Entropic Inequality Constraints from e-separation Relations in Directed Acyclic Graphs with Hidden Variables15 Jul 2021
- 2021Ordering-Based Causal Discovery with Reinforcement Learning14 May 2021
- 2021Deconfounded Score Method: Scoring DAGs with Dense Unobserved Confounding28 Mar 2021
- 2021Integer Programming for Causal Structure Learning in the Presence of Latent Variables5 Feb 2021
- 2021Identification of Latent Variables From Graphical Model Residuals7 Jan 2021
- 2021A survey of Bayesian Network structure learningcited by 85
- 2021Ordering-Based Causal Discovery with Reinforcement Learningcited by 55
- 2022Causal Structure Learning: a Combinatorial Perspectivecited by 46
- 2021Integer Programming for Causal Structure Learning in the Presence of Latent Variablescited by 14
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnablecited by 13
- 2024Recursive Causal Discoverycited by 12
- 2022Novel Ordering-based Approaches for Causal Structure Learning in the Presence of Unobserved Variablescited by 10
- 2023Constraint-Free Structure Learning with Smooth Acyclic Orientationscited by 10
- 2021Deconfounded Score Method: Scoring DAGs with Dense Unobserved Confoundingcited by 9
- 2023Expert-Aided Causal Discovery of Ancestral Graphscited by 8
- 2024Scalable Differentiable Causal Discovery in the Presence of Latent Confounders with Skeleton Posterior (Extended Version)cited by 6
- 2022The Impact of Variable Ordering on Bayesian Network Structure Learningcited by 5
12 most cited of 26 All 26 (JSON)
- 2026Score-Based Causal Discovery of Latent Variable Causal Models19 May 2026
- 2025Score-based Greedy Search for Structure Identification of Partially Observed Linear Causal Models5 Oct 2025
- 2025DAG DECORation: Continuous Optimization for Structure Learning under Hidden Confounding2 Oct 2025
- 2025Score-informed Neural Operator for Enhancing Ordering-based Causal Discovery18 Aug 2025
- 2024QWO: Speeding Up Permutation-Based Causal Discovery in LiGAMs30 Oct 2024
- 2024Scalable Differentiable Causal Discovery in the Presence of Latent Confounders with Skeleton Posterior (Extended Version)15 Jun 2024
- 2024Machine Learning and Data Analysis Using Posets: A Survey3 Apr 2024
- 2024Recursive Causal Discovery14 Mar 2024
- 2023A Review and Roadmap of Deep Causal Model from Different Causal Structures and Representations2 Nov 2023
- 2023Expert-Aided Causal Discovery of Ancestral Graphs21 Sep 2023
- 2023Constraint-Free Structure Learning with Smooth Acyclic Orientations15 Sep 2023
- 2023s-ID: Causal Effect Identification in a Sub-Population5 Sep 2023
12 newest of 26 All 26 (JSON)