Heteroskedastic PCA: Algorithm, Optimality, and Applications
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Abstract (arXiv)
A general framework for principal component analysis (PCA) in the presence of heteroskedastic noise is introduced. We propose an algorithm called HeteroPCA, which involves iteratively imputing the diagonal entries of the sample covariance matrix to remove estimation bias due to heteroskedasticity. This procedure is computationally efficient and provably optimal under the generalized spiked covariance model. A key technical step is a deterministic robust perturbation analysis on singular subspaces, which can be of independent interest. The effectiveness of the proposed algorithm is demonstrated in a suite of problems in high-dimensional statistics, including singular value decomposition (SVD) under heteroskedastic noise, Poisson PCA, and SVD for heteroskedastic and incomplete data.
Key facts. Cited by 33 papers in the map (data through 7 Oct 2026). First posted on arXiv 19 Oct 2018.
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Citing papers per year: 2021: 7; 2022: 3; 2023: 6; 2024: 10; 2025: 4; 2026: 3.
33 papers.
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- 2021The Power of Contrast for Feature Learning: A Theoretical Analysiscited by 53
- 2023Understanding Multimodal Contrastive Learning and Incorporating Unpaired Datacited by 43
- 2021Inference for Heteroskedastic PCA with Missing Datacited by 21
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noisecited by 14
- 2024Optimal Differentially Private PCA and Estimation for Spiked Covariance Matricescited by 10
- 2021Fundamental limits for rank-one matrix estimation with groupwise heteroskedasticitycited by 8
- 2022Estimating Higher-Order Mixed Memberships via the ℓ2,∞ Tensor Perturbation Boundcited by 8
- 2023Deflated HeteroPCA: Overcoming the curse of ill-conditioning in heteroskedastic PCAcited by 7
- 2023Safeguarding Data in Multimodal AI: A Differentially Private Approach to CLIP Trainingcited by 7
- 2024Optimal Estimation of Shared Singular Subspaces across Multiple Noisy Matricescited by 6
- 2024Matrix Denoising with Doubly Heteroscedastic Noise: Fundamental Limits and Optimal Spectral Methodscited by 5
- 2024High-dimensional analysis of ridge regression for non-identically distributed data with a variance profilecited by 4
21 more
- 2021Self-Supervised Metric Learning in Multi-View Data: A Downstream Task Perspectivecited by 3
- 2024LEARNER: A Transfer Learning Method for Low-Rank Matrix Estimationcited by 3
- 2022Treatment Effect Estimation with Unobserved and Heterogeneous Confounding Variablescited by 2
- 2023ALPCAH: Sample-wise Heteroscedastic PCA with Tail Singular Value Regularizationcited by 2
- 2023Optimal vintage factor analysis with deflation varimaxcited by 2
- 2024Contrastive Learning on Multimodal Analysis of Electronic Health Recordscited by 2
- 2025ALPCAH: Subspace Learning for Sample-wise Heteroscedastic Datacited by 2
- 2021Minimax Estimation of Linear Functions of Eigenvectors in the Face of Small Eigen-Gapscited by 1
- 2021Causal Discovery in High-Dimensional Point Process Networks with Hidden Nodescited by 1
- 2021Uncertainty Quantification For Low-Rank Matrix Completion With Heterogeneous and Sub-Exponential Noisecited by 1
- 2023Mode-wise Principal Subspace Pursuit and Matrix Spiked Covariance Modelcited by 1
- 2025ALPCAHUS: Subspace Clustering for Heteroscedastic Datacited by 1
- 2024On Minimum Trace Factor Analysis -- An Old Song Sung to a New Tunecited by 0
- 2024Bias-Corrected Joint Spectral Embedding for Multilayer Networks with Invariant Subspace: Entrywise Eigenvector Perturbation and Inferencecited by 0
- 2024Statistical Inference in Tensor Completion: Optimal Uncertainty Quantification and Statistical-to-Computational Gapscited by 0
- 2024Feature Selection for Latent Factor Modelscited by 0
- 2025Subspace Recovery in Winsorized PCA: Insights into Accuracy and Robustnesscited by 0
- 2025T-Rex: Fitting a Robust Factor Model via Expectation-Maximizationcited by 0
- 2026Adjacency Spectral Embeddings of Correlation Networkscited by 0
- 2026Diagonal Attenuation: A Finite-Sample Correction for PCAcited by 0
- 2026Heteroskedastic Canonical Polyadic Tensor Decompositioncited by 0
- 2026Heteroskedastic Canonical Polyadic Tensor Decomposition30 Sep 2026
- 2026Diagonal Attenuation: A Finite-Sample Correction for PCA5 Sep 2026
- 2026Adjacency Spectral Embeddings of Correlation Networks24 Feb 2026
- 2025ALPCAHUS: Subspace Clustering for Heteroscedastic Data25 May 2025
- 2025T-Rex: Fitting a Robust Factor Model via Expectation-Maximization17 May 2025
- 2025ALPCAH: Subspace Learning for Sample-wise Heteroscedastic Data12 May 2025
- 2025Subspace Recovery in Winsorized PCA: Insights into Accuracy and Robustness23 Feb 2025
- 2024LEARNER: A Transfer Learning Method for Low-Rank Matrix Estimation29 Dec 2024
- 2024Feature Selection for Latent Factor Models13 Dec 2024
- 2024Optimal Estimation of Shared Singular Subspaces across Multiple Noisy Matrices26 Nov 2024
- 2024Statistical Inference in Tensor Completion: Optimal Uncertainty Quantification and Statistical-to-Computational Gaps15 Oct 2024
- 2024Bias-Corrected Joint Spectral Embedding for Multilayer Networks with Invariant Subspace: Entrywise Eigenvector Perturbation and Inference12 Jun 2024
21 more
- 2024Matrix Denoising with Doubly Heteroscedastic Noise: Fundamental Limits and Optimal Spectral Methods22 May 2024
- 2024High-dimensional analysis of ridge regression for non-identically distributed data with a variance profile29 Mar 2024
- 2024Contrastive Learning on Multimodal Analysis of Electronic Health Records22 Mar 2024
- 2024On Minimum Trace Factor Analysis -- An Old Song Sung to a New Tune4 Feb 2024
- 2024Optimal Differentially Private PCA and Estimation for Spiked Covariance Matrices8 Jan 2024
- 2023Optimal vintage factor analysis with deflation varimax16 Oct 2023
- 2023ALPCAH: Sample-wise Heteroscedastic PCA with Tail Singular Value Regularization6 Jul 2023
- 2023Mode-wise Principal Subspace Pursuit and Matrix Spiked Covariance Model2 Jul 2023
- 2023Safeguarding Data in Multimodal AI: A Differentially Private Approach to CLIP Training13 Jun 2023
- 2023Deflated HeteroPCA: Overcoming the curse of ill-conditioning in heteroskedastic PCA10 Mar 2023
- 2023Understanding Multimodal Contrastive Learning and Incorporating Unpaired Data13 Feb 2023
- 2022Estimating Higher-Order Mixed Memberships via the ℓ2,∞ Tensor Perturbation Bound16 Dec 2022
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noise24 Oct 2022
- 2022Treatment Effect Estimation with Unobserved and Heterogeneous Confounding Variables29 Jul 2022
- 2021Uncertainty Quantification For Low-Rank Matrix Completion With Heterogeneous and Sub-Exponential Noise22 Oct 2021
- 2021The Power of Contrast for Feature Learning: A Theoretical Analysis6 Oct 2021
- 2021Causal Discovery in High-Dimensional Point Process Networks with Hidden Nodes22 Sep 2021
- 2021Inference for Heteroskedastic PCA with Missing Data26 Jul 2021
- 2021Fundamental limits for rank-one matrix estimation with groupwise heteroskedasticity22 Jun 2021
- 2021Self-Supervised Metric Learning in Multi-View Data: A Downstream Task Perspective14 Jun 2021
- 2021Minimax Estimation of Linear Functions of Eigenvectors in the Face of Small Eigen-Gaps7 Apr 2021
- 2021The Power of Contrast for Feature Learning: A Theoretical Analysiscited by 53
- 2023Understanding Multimodal Contrastive Learning and Incorporating Unpaired Datacited by 43
- 2021Inference for Heteroskedastic PCA with Missing Datacited by 21
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noisecited by 14
- 2024Optimal Differentially Private PCA and Estimation for Spiked Covariance Matricescited by 10
- 2021Fundamental limits for rank-one matrix estimation with groupwise heteroskedasticitycited by 8
- 2022Estimating Higher-Order Mixed Memberships via the ℓ2,∞ Tensor Perturbation Boundcited by 8
- 2023Deflated HeteroPCA: Overcoming the curse of ill-conditioning in heteroskedastic PCAcited by 7
- 2023Safeguarding Data in Multimodal AI: A Differentially Private Approach to CLIP Trainingcited by 7
- 2024Optimal Estimation of Shared Singular Subspaces across Multiple Noisy Matricescited by 6
- 2024Matrix Denoising with Doubly Heteroscedastic Noise: Fundamental Limits and Optimal Spectral Methodscited by 5
- 2024High-dimensional analysis of ridge regression for non-identically distributed data with a variance profilecited by 4
12 most cited of 33 All 33 (JSON)
- 2026Heteroskedastic Canonical Polyadic Tensor Decomposition30 Sep 2026
- 2026Diagonal Attenuation: A Finite-Sample Correction for PCA5 Sep 2026
- 2026Adjacency Spectral Embeddings of Correlation Networks24 Feb 2026
- 2025ALPCAHUS: Subspace Clustering for Heteroscedastic Data25 May 2025
- 2025T-Rex: Fitting a Robust Factor Model via Expectation-Maximization17 May 2025
- 2025ALPCAH: Subspace Learning for Sample-wise Heteroscedastic Data12 May 2025
- 2025Subspace Recovery in Winsorized PCA: Insights into Accuracy and Robustness23 Feb 2025
- 2024LEARNER: A Transfer Learning Method for Low-Rank Matrix Estimation29 Dec 2024
- 2024Feature Selection for Latent Factor Models13 Dec 2024
- 2024Optimal Estimation of Shared Singular Subspaces across Multiple Noisy Matrices26 Nov 2024
- 2024Statistical Inference in Tensor Completion: Optimal Uncertainty Quantification and Statistical-to-Computational Gaps15 Oct 2024
- 2024Bias-Corrected Joint Spectral Embedding for Multilayer Networks with Invariant Subspace: Entrywise Eigenvector Perturbation and Inference12 Jun 2024
12 newest of 33 All 33 (JSON)