Measuring behavior across scales
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Abstract (arXiv)
The need for high-throughput, precise, and meaningful methods for measuring behavior has been amplified by our recent successes in measuring and manipulating neural circuitry. The largest challenges associated with moving in this direction, however, are not technical but are instead conceptual: what numbers should one put on the movements an animal is performing (or not performing)? In this review, I will describe how theoretical and data analytical ideas are interfacing with recently-developed computational and experimental methodologies to answer these questions across a variety of contexts, length scales, and time scales. I will attempt to highlight commonalities between approaches and areas where further advances are necessary to place behavior on the same quantitative footing as other scientific fields.
Key facts. Cited by 10 papers in the map (data through 7 Oct 2026). First posted on arXiv 15 Dec 2017.
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Citing papers per year: 2021: 2; 2022: 1; 2023: 4; 2024: 2; 2025: 0; 2026: 1.
10 papers.
- 2021Representation learning for neural population activity with Neural Data Transformerscited by 48
- 20233D-MuPPET: 3D Multi-Pigeon Pose Estimation and Trackingcited by 12
- 2024Exploring Behavior-Relevant and Disentangled Neural Dynamics with Generative Diffusion Modelscited by 9
- 2022Open-Source Tools for Behavioral Video Analysis: Setup, Methods, and Developmentcited by 4
- 2023CNN-Based Action Recognition and Pose Estimation for Classifying Animal Behavior from Videos: A Surveycited by 4
- 2021Ada-VSR: Adaptive Video Super-Resolution with Meta-Learningcited by 3
- 2023Fast spline detection in high density microscopy datacited by 3
- 2024Neural timescales from a computational perspectivecited by 3
- 2023Inferring Local Structure from Pairwise Correlationscited by 0
- 2026Sparse-View Interpretable 3D Animal Behavior Representations for Neural Encoding and Decodingcited by 0
- 2026Sparse-View Interpretable 3D Animal Behavior Representations for Neural Encoding and Decoding28 Sep 2026
- 2024Exploring Behavior-Relevant and Disentangled Neural Dynamics with Generative Diffusion Models12 Oct 2024
- 2024Neural timescales from a computational perspective4 Sep 2024
- 20233D-MuPPET: 3D Multi-Pigeon Pose Estimation and Tracking29 Aug 2023
- 2023Inferring Local Structure from Pairwise Correlations7 May 2023
- 2023CNN-Based Action Recognition and Pose Estimation for Classifying Animal Behavior from Videos: A Survey15 Jan 2023
- 2023Fast spline detection in high density microscopy data11 Jan 2023
- 2022Open-Source Tools for Behavioral Video Analysis: Setup, Methods, and Development6 Apr 2022
- 2021Ada-VSR: Adaptive Video Super-Resolution with Meta-Learning5 Aug 2021
- 2021Representation learning for neural population activity with Neural Data Transformers2 Aug 2021