ExaGeoStat: A High Performance Unified Software for Geostatistics on Manycore Systems
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Abstract (arXiv)
We present ExaGeoStat, a high performance framework for geospatial statistics in climate and environment modeling. In contrast to simulation based on partial differential equations derived from first-principles modeling, ExaGeoStat employs a statistical model based on the evaluation of the Gaussian log-likelihood function, which operates on a large dense covariance matrix. Generated by the parametrizable Matern covariance function, the resulting matrix is symmetric and positive definite. The computational tasks involved during the evaluation of the Gaussian log-likelihood function become daunting as the number n of geographical locations grows, as O(n2) storage and O(n3) operations are required. While many approximation methods have been devised from the side of statistical modeling to ameliorate these polynomial complexities, we are interested here in the complementary approach of evaluating the exact algebraic result by exploiting advances in solution algorithms and many-core computer architectures. Using state-of-the-art high performance dense linear algebra libraries associated with various leading edge parallel architectures (Intel KNLs, NVIDIA GPUs, and distributed-memory systems), ExaGeoStat raises the game for statistical applications from climate and environmental science. ExaGeoStat provides a reference evaluation of statistical parameters, with which to assess the validity of the various approaches based on approximation. The framework takes a first step in the merger of large-scale data analytics and extreme computing for geospatial statistical applications, to be followed by additional complexity reducing improvements from the solver side that can be implemented under the same interface. Thus, a single uncompromised statistical model can ultimately be executed in a wide variety of emerging exascale environments.
Key facts. Cited by 5 papers in the map (data through 7 Oct 2026). First posted on arXiv 9 Aug 2017.
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Citing papers per year: 2021: 1; 2022: 0; 2023: 1; 2024: 3.
5 papers.
- 2021Modeling Massive Spatial Datasets Using a Conjugate Bayesian Linear Regression Frameworkcited by 2
- 2023Efficient Large-scale Nonstationary Spatial Covariance Function Estimation Using Convolutional Neural Networkscited by 1
- 2024Implementation and Analysis of GPU Algorithms for Vecchia Approximationcited by 1
- 2024Toward Capturing Genetic Epistasis From Multivariate Genome-Wide Association Studies Using Mixed-Precision Kernel Ridge Regressioncited by 1
- 2024A Generalized Unified Skew-Normal Process with Neural Bayes Inferencecited by 0
- 2024A Generalized Unified Skew-Normal Process with Neural Bayes Inference26 Nov 2024
- 2024Toward Capturing Genetic Epistasis From Multivariate Genome-Wide Association Studies Using Mixed-Precision Kernel Ridge Regression3 Sep 2024
- 2024Implementation and Analysis of GPU Algorithms for Vecchia Approximation3 Jul 2024
- 2023Efficient Large-scale Nonstationary Spatial Covariance Function Estimation Using Convolutional Neural Networks20 Jun 2023
- 2021Modeling Massive Spatial Datasets Using a Conjugate Bayesian Linear Regression Framework9 Sep 2021