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Linear-size CDAWG: new repetition-aware indexing and grammar compression

arXiv 1705.09779 ↗First posted 27 May 2017cs.DScited by 1

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Abstract (arXiv)

In this paper, we propose a novel approach to combine compact directed acyclic word graphs (CDAWGs) and grammar-based compression. This leads us to an efficient self-index, called Linear-size CDAWGs (L-CDAWGs), which can be represented with O(tilde eT log n) bits of space allowing for O(log n)-time random and O(1)-time sequential accesses to edge labels, and O(m log σ + occ)-time pattern matching. Here, tilde eT is the number of all extensions of maximal repeats in T, n and m are respectively the lengths of the text T and a given pattern, σ is the alphabet size, and occ is the number of occurrences of the pattern in T. The repetitiveness measure tilde eT is known to be much smaller than the text length n for highly repetitive text. For constant alphabets, our L-CDAWGs achieve O(m + occ) pattern matching time with O(eTr log n) bits of space, which improves the pattern matching time of Belazzougui et al.'s run-length BWT-CDAWGs by a factor of log log n, with the same space complexity. Here, eTr is the number of right extensions of maximal repeats in T. As a byproduct, our result gives a way of constructing an SLP of size O(tilde eT) for a given text T in O(n + tilde eT log σ) time.

Key facts. Cited by 1 paper in the map (data through 7 Oct 2026). First posted on arXiv 27 May 2017.

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