Homophily and missing links in citation networks
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Abstract (arXiv)
Citation networks have been widely used to study the evolution of science through the lenses of the underlying patterns of knowledge flows among academic papers, authors, research sub-fields, and scientific journals. Here we focus on citation networks to cast light on the salience of homophily, namely the principle that similarity breeds connection, for knowledge transfer between papers. To this end, we assess the degree to which citations tend to occur between papers that are concerned with seemingly related topics or research problems. Drawing on a large data set of articles published in the journals of the American Physical Society between 1893 and 2009, we propose a novel method for measuring the similarity between articles through the statistical validation of the overlap between their bibliographies. Results suggest that the probability of a citation made by one article to another is indeed an increasing function of the similarity between the two articles. Our study also enables us to uncover missing citations between pairs of highly related articles, and may thus help identify barriers to effective knowledge flows. By quantifying the proportion of missing citations, we conduct a comparative assessment of distinct journals and research sub-fields in terms of their ability to facilitate or impede the dissemination of knowledge. Findings indicate that knowledge transfer seems to be more effectively facilitated by journals of wide visibility, such as Physical Review Letters, than by lower-impact ones. Our study has important implications for authors, editors and reviewers of scientific journals, as well as public preprint repositories, as it provides a procedure for recommending relevant yet missing references and properly integrating bibliographies of papers.
Key facts. Cited by 21 papers in the map (data through 14 Oct 2026). First posted on arXiv 24 Nov 2015.
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Citing papers per year: 2021: 1; 2022: 8; 2023: 4; 2024: 1; 2025: 4; 2026: 3.
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- 2021Is Homophily a Necessity for Graph Neural Networks?cited by 182
- 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
- 2022Graph Neural Networks for Graphs with Heterophily: A Surveycited by 175
- 2023Can LLMs Effectively Leverage Graph Structural Information through Prompts, and Why?cited by 31
- 2022Graph Soft-Contrastive Learning via Neighborhood Rankingcited by 16
- 2023On Performance Discrepancies Across Local Homophily Levels in Graph Neural Networkscited by 13
- 2022RoSA: A Robust Self-Aligned Framework for Node-Node Graph Contrastive Learningcited by 12
- 2022Localized Contrastive Learning on Graphscited by 10
- 2026What Should I Cite? A RAG Benchmark for Academic Citation Predictioncited by 5
- 2025GraphiT: Efficient Node Classification on Text-Attributed Graphs with Prompt Optimized LLMscited by 4
- 2023OrthoReg: Improving Graph-regularized MLPs via Orthogonality Regularizationcited by 2
- 2024SciEvo: A 2 Million, 30-Year Cross-disciplinary Dataset for Temporal Scientometric Analysiscited by 2
9 more
- 2025Glance for Context: Learning When to Leverage LLMs for Node-Aware GNN-LLM Fusioncited by 2
- 2022Detecting and analyzing missing citations to published scientific entitiescited by 1
- 2022Generalized Laplacian Regularized Framelet Graph Neural Networkscited by 0
- 2022Revisiting Heterophily in Graph Convolution Networks by Learning Representations Across Topological and Feature Spacescited by 0
- 2023Automated Polynomial Filter Learning for Graph Neural Networkscited by 0
- 2025Heterophily-informed Message Passingcited by 0
- 2025From scratch to silver: Creating trustworthy training data for patent-SDG classification using Large Language Modelscited by 0
- 2026Homophily-aware Supervised Contrastive Counterfactual Augmented Fair Graph Neural Networkcited by 0
- 2026Neighbourhood Transformer: Switchable Attention for Monophily-Aware Graph Learningcited by 0
- 2026Neighbourhood Transformer: Switchable Attention for Monophily-Aware Graph Learning10 Apr 2026
- 2026Homophily-aware Supervised Contrastive Counterfactual Augmented Fair Graph Neural Network8 Feb 2026
- 2026What Should I Cite? A RAG Benchmark for Academic Citation Prediction21 Jan 2026
- 2025Glance for Context: Learning When to Leverage LLMs for Node-Aware GNN-LLM Fusion12 Oct 2025
- 2025From scratch to silver: Creating trustworthy training data for patent-SDG classification using Large Language Models11 Sep 2025
- 2025Heterophily-informed Message Passing28 Apr 2025
- 2025GraphiT: Efficient Node Classification on Text-Attributed Graphs with Prompt Optimized LLMs14 Feb 2025
- 2024SciEvo: A 2 Million, 30-Year Cross-disciplinary Dataset for Temporal Scientometric Analysis12 Oct 2024
- 2023Can LLMs Effectively Leverage Graph Structural Information through Prompts, and Why?28 Sep 2023
- 2023Automated Polynomial Filter Learning for Graph Neural Networks16 Jul 2023
- 2023On Performance Discrepancies Across Local Homophily Levels in Graph Neural Networks8 Jun 2023
- 2023OrthoReg: Improving Graph-regularized MLPs via Orthogonality Regularization31 Jan 2023
9 more
- 2022Localized Contrastive Learning on Graphs8 Dec 2022
- 2022Revisiting Heterophily in Graph Convolution Networks by Learning Representations Across Topological and Feature Spaces1 Nov 2022
- 2022Generalized Laplacian Regularized Framelet Graph Neural Networks27 Oct 2022
- 2022Detecting and analyzing missing citations to published scientific entities18 Oct 2022
- 2022Graph Soft-Contrastive Learning via Neighborhood Ranking28 Sep 2022
- 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophily15 May 2022
- 2022RoSA: A Robust Self-Aligned Framework for Node-Node Graph Contrastive Learning29 Apr 2022
- 2022Graph Neural Networks for Graphs with Heterophily: A Survey14 Feb 2022
- 2021Is Homophily a Necessity for Graph Neural Networks?11 Jun 2021
- 2021Is Homophily a Necessity for Graph Neural Networks?cited by 182
- 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
- 2022Graph Neural Networks for Graphs with Heterophily: A Surveycited by 175
- 2023Can LLMs Effectively Leverage Graph Structural Information through Prompts, and Why?cited by 31
- 2022Graph Soft-Contrastive Learning via Neighborhood Rankingcited by 16
- 2023On Performance Discrepancies Across Local Homophily Levels in Graph Neural Networkscited by 13
- 2022RoSA: A Robust Self-Aligned Framework for Node-Node Graph Contrastive Learningcited by 12
- 2022Localized Contrastive Learning on Graphscited by 10
- 2025GraphiT: Efficient Node Classification on Text-Attributed Graphs with Prompt Optimized LLMscited by 4
- 2023OrthoReg: Improving Graph-regularized MLPs via Orthogonality Regularizationcited by 2
- 2024SciEvo: A 2 Million, 30-Year Cross-disciplinary Dataset for Temporal Scientometric Analysiscited by 2
- 2025Glance for Context: Learning When to Leverage LLMs for Node-Aware GNN-LLM Fusioncited by 2
12 most cited of 20 All 20 (JSON)
- 2026Neighbourhood Transformer: Switchable Attention for Monophily-Aware Graph Learning10 Apr 2026
- 2026Homophily-aware Supervised Contrastive Counterfactual Augmented Fair Graph Neural Network8 Feb 2026
- 2025Glance for Context: Learning When to Leverage LLMs for Node-Aware GNN-LLM Fusion12 Oct 2025
- 2025From scratch to silver: Creating trustworthy training data for patent-SDG classification using Large Language Models11 Sep 2025
- 2025Heterophily-informed Message Passing28 Apr 2025
- 2025GraphiT: Efficient Node Classification on Text-Attributed Graphs with Prompt Optimized LLMs14 Feb 2025
- 2024SciEvo: A 2 Million, 30-Year Cross-disciplinary Dataset for Temporal Scientometric Analysis12 Oct 2024
- 2023Can LLMs Effectively Leverage Graph Structural Information through Prompts, and Why?28 Sep 2023
- 2023Automated Polynomial Filter Learning for Graph Neural Networks16 Jul 2023
- 2023On Performance Discrepancies Across Local Homophily Levels in Graph Neural Networks8 Jun 2023
- 2023OrthoReg: Improving Graph-regularized MLPs via Orthogonality Regularization31 Jan 2023
- 2022Localized Contrastive Learning on Graphs8 Dec 2022
12 newest of 20 All 20 (JSON)