Partition MCMC for inference on acyclic digraphs
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Abstract (arXiv)
Acyclic digraphs are the underlying representation of Bayesian networks, a widely used class of probabilistic graphical models. Learning the underlying graph from data is a way of gaining insights about the structural properties of a domain. Structure learning forms one of the inference challenges of statistical graphical models. MCMC methods, notably structure MCMC, to sample graphs from the posterior distribution given the data are probably the only viable option for Bayesian model averaging. Score modularity and restrictions on the number of parents of each node allow the graphs to be grouped into larger collections, which can be scored as a whole to improve the chain's convergence. Current examples of algorithms taking advantage of grouping are the biased order MCMC, which acts on the alternative space of permuted triangular matrices, and non ergodic edge reversal moves. Here we propose a novel algorithm, which employs the underlying combinatorial structure of DAGs to define a new grouping. As a result convergence is improved compared to structure MCMC, while still retaining the property of producing an unbiased sample. Finally the method can be combined with edge reversal moves to improve the sampler further.
Key facts. Cited by 33 papers in the map (data through 7 Oct 2026). First posted on arXiv 20 Apr 2015.
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Citing papers per year: 2021: 5; 2022: 7; 2023: 5; 2024: 8; 2025: 5; 2026: 3.
33 papers.
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- 2022Bayesian Structure Learning with Generative Flow Networkscited by 153
- 2021DiBS: Differentiable Bayesian Structure Learningcited by 105
- 2021A survey of Bayesian Network structure learningcited by 85
- 2022Differentiable DAG Samplingcited by 46
- 2022Causal Structure Learning: a Combinatorial Perspectivecited by 46
- 2021Variational Causal Networks: Approximate Bayesian Inference over Causal Structurescited by 43
- 2023BayesDAG: Gradient-Based Posterior Inference for Causal Discoverycited by 33
- 2021Bayesian structure learning and sampling of Bayesian networks with the R package BiDAGcited by 17
- 2022Tractable Uncertainty for Structure Learningcited by 15
- 2022Causal Entropy Optimizationcited by 13
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnablecited by 13
- 2021Benchpress: A Scalable and Versatile Workflow for Benchmarking Structure Learning Algorithmscited by 11
21 more
- 2025Estimating Interventional Distributions with Uncertain Causal Graphs through Meta-Learningcited by 11
- 2024Effective Bayesian Causal Inference via Structural Marginalisation and Autoregressive Orderscited by 6
- 2022The interventional Bayesian Gaussian equivalent score for Bayesian causal inference with unknown soft interventionscited by 4
- 2023A Bayesian Take on Gaussian Process Networkscited by 4
- 2023Structure Learning with Adaptive Random Neighborhood Informed MCMCcited by 4
- 2024Possible Principles for Aligned Structure Learning Agentscited by 3
- 2023Causal structure learning with momentum: Sampling distributions over Markov Equivalence Classes of DAGscited by 2
- 2024Bayesian Causal Inference with Gaussian Process Networkscited by 2
- 2024Greedy equivalence search for nonparametric graphical modelscited by 2
- 2026Test-Time Learning of Causal Structure from Interventional Datacited by 2
- 2025Covariate Dependent Mixture of Bayesian Networkscited by 1
- 2025Lower Bounds on the Size of Markov Equivalence Classescited by 1
- 2025Consistent Bayesian causal discovery for structural equation models with equal error variancescited by 1
- 2022Reinforcement Causal Structure Learning on Order Graphcited by 0
- 2024Scalable Structure Learning for Sparse Context-Specific Systemscited by 0
- 2024Exact discovery is polynomial for certain sparse causal Bayesian networkscited by 0
- 2024Enhancing Solution Efficiency in Reinforcement Learning: Leveraging Sub-GFlowNet and Entropy Integrationcited by 0
- 2024Optimal Particle-based Approximation of Discrete Distributions (OPAD)cited by 0
- 2025Scaling Up Bayesian DAG Samplingcited by 0
- 2026Interpretable Causal Discovery via Causal-Effect Constraintscited by 0
- 2026MARCEDES: Score-based causal discovery under non-Gaussianity with continuous optimizationcited by 0
- 2026MARCEDES: Score-based causal discovery under non-Gaussianity with continuous optimization25 Sep 2026
- 2026Interpretable Causal Discovery via Causal-Effect Constraints12 Aug 2026
- 2026Test-Time Learning of Causal Structure from Interventional Data22 Feb 2026
- 2025Scaling Up Bayesian DAG Sampling29 Oct 2025
- 2025Consistent Bayesian causal discovery for structural equation models with equal error variances18 Sep 2025
- 2025Estimating Interventional Distributions with Uncertain Causal Graphs through Meta-Learning7 Jul 2025
- 2025Lower Bounds on the Size of Markov Equivalence Classes26 Jun 2025
- 2025Covariate Dependent Mixture of Bayesian Networks10 Jan 2025
- 2024Optimal Particle-based Approximation of Discrete Distributions (OPAD)30 Nov 2024
- 2024Enhancing Solution Efficiency in Reinforcement Learning: Leveraging Sub-GFlowNet and Entropy Integration1 Oct 2024
- 2024Possible Principles for Aligned Structure Learning Agents30 Sep 2024
- 2024Greedy equivalence search for nonparametric graphical models25 Jun 2024
21 more
- 2024Exact discovery is polynomial for certain sparse causal Bayesian networks21 Jun 2024
- 2024Effective Bayesian Causal Inference via Structural Marginalisation and Autoregressive Orders22 Feb 2024
- 2024Scalable Structure Learning for Sparse Context-Specific Systems12 Feb 2024
- 2024Bayesian Causal Inference with Gaussian Process Networks1 Feb 2024
- 2023Structure Learning with Adaptive Random Neighborhood Informed MCMC1 Nov 2023
- 2023Causal structure learning with momentum: Sampling distributions over Markov Equivalence Classes of DAGs9 Oct 2023
- 2023BayesDAG: Gradient-Based Posterior Inference for Causal Discovery26 Jul 2023
- 2023A Bayesian Take on Gaussian Process Networks20 Jun 2023
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnable9 Mar 2023
- 2022Reinforcement Causal Structure Learning on Order Graph22 Nov 2022
- 2022Causal Entropy Optimization23 Aug 2022
- 2022Causal Structure Learning: a Combinatorial Perspective2 Jun 2022
- 2022The interventional Bayesian Gaussian equivalent score for Bayesian causal inference with unknown soft interventions5 May 2022
- 2022Tractable Uncertainty for Structure Learning29 Apr 2022
- 2022Differentiable DAG Sampling16 Mar 2022
- 2022Bayesian Structure Learning with Generative Flow Networks28 Feb 2022
- 2021A survey of Bayesian Network structure learning23 Sep 2021
- 2021Benchpress: A Scalable and Versatile Workflow for Benchmarking Structure Learning Algorithms8 Jul 2021
- 2021Variational Causal Networks: Approximate Bayesian Inference over Causal Structures14 Jun 2021
- 2021DiBS: Differentiable Bayesian Structure Learning25 May 2021
- 2021Bayesian structure learning and sampling of Bayesian networks with the R package BiDAG2 May 2021
- 2022Bayesian Structure Learning with Generative Flow Networkscited by 153
- 2021DiBS: Differentiable Bayesian Structure Learningcited by 105
- 2021A survey of Bayesian Network structure learningcited by 85
- 2022Differentiable DAG Samplingcited by 46
- 2022Causal Structure Learning: a Combinatorial Perspectivecited by 46
- 2021Variational Causal Networks: Approximate Bayesian Inference over Causal Structurescited by 43
- 2023BayesDAG: Gradient-Based Posterior Inference for Causal Discoverycited by 33
- 2021Bayesian structure learning and sampling of Bayesian networks with the R package BiDAGcited by 17
- 2022Tractable Uncertainty for Structure Learningcited by 15
- 2022Causal Entropy Optimizationcited by 13
- 2023Computably Continuous Reinforcement-Learning Objectives are PAC-learnablecited by 13
- 2021Benchpress: A Scalable and Versatile Workflow for Benchmarking Structure Learning Algorithmscited by 11
12 most cited of 33 All 33 (JSON)
- 2026MARCEDES: Score-based causal discovery under non-Gaussianity with continuous optimization25 Sep 2026
- 2026Interpretable Causal Discovery via Causal-Effect Constraints12 Aug 2026
- 2026Test-Time Learning of Causal Structure from Interventional Data22 Feb 2026
- 2025Scaling Up Bayesian DAG Sampling29 Oct 2025
- 2025Consistent Bayesian causal discovery for structural equation models with equal error variances18 Sep 2025
- 2025Estimating Interventional Distributions with Uncertain Causal Graphs through Meta-Learning7 Jul 2025
- 2025Lower Bounds on the Size of Markov Equivalence Classes26 Jun 2025
- 2025Covariate Dependent Mixture of Bayesian Networks10 Jan 2025
- 2024Optimal Particle-based Approximation of Discrete Distributions (OPAD)30 Nov 2024
- 2024Enhancing Solution Efficiency in Reinforcement Learning: Leveraging Sub-GFlowNet and Entropy Integration1 Oct 2024
- 2024Possible Principles for Aligned Structure Learning Agents30 Sep 2024
- 2024Greedy equivalence search for nonparametric graphical models25 Jun 2024
12 newest of 33 All 33 (JSON)