# DeShortcut-Align: Decoupling Spurious Shortcuts for Robust Safety Alignment in Large Reasoning Models

arXiv: https://arxiv.org/abs/2609.34896 · HTML: https://mlsanity.com/paper/2609.34896/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Placed in Reasoning for agents, planning and code, one of 17 directions in LLM reasoning.
- Builds on 26 of its 49 references that are in the map.
- First posted on arXiv 28 Sep 2026.

## Placed in

- LLM reasoning / [Reasoning for agents, planning and code](https://mlsanity.com/lr/reasoning-for-agents-planning-and-code/)
- LLM alignment / RLHF / preference optimisation / [Safety alignment and jailbreak attacks](https://mlsanity.com/alignment/safety-alignment-and-jailbreak-attacks/)
- LLM safety and security / [Safety alignment, refusal and guardrails](https://mlsanity.com/safety/safety-alignment-refusal-and-guardrails/)

## Builds on (most cited first, 26 of 26)

- [Proximal Policy Optimization Algorithms](https://mlsanity.com/paper/1707.06347/) (2017)
- [DeepSeekMath: Pushing the Limits of Mathematical Reasoning in Open Language Models](https://mlsanity.com/paper/2402.03300/) (2024)
- [Qwen3 Technical Report](https://mlsanity.com/paper/2505.09388/) (2025)
- [Evaluating Large Language Models Trained on Code](https://mlsanity.com/paper/2107.03374/) (2021)
- [DeepSeek-R1: Incentivizing Reasoning Capability in LLMs via Reinforcement Learning](https://mlsanity.com/paper/2501.12948/) (2025)
- [GPT-4o System Card](https://mlsanity.com/paper/2410.21276/) (2024)
- [Gemini 2.5: Pushing the Frontier with Advanced Reasoning, Multimodality, Long Context, and Next Generation Agentic Capabilities](https://mlsanity.com/paper/2507.06261/) (2025)
- [Universal and Transferable Adversarial Attacks on Aligned Language Models](https://mlsanity.com/paper/2307.15043/) (2023)
- [OpenAI o1 System Card](https://mlsanity.com/paper/2412.16720/) (2024)
- [Llama Guard: LLM-based Input-Output Safeguard for Human-AI Conversations](https://mlsanity.com/paper/2312.06674/) (2023)
- [PyTorch FSDP: Experiences on Scaling Fully Sharded Data Parallel](https://mlsanity.com/paper/2304.11277/) (2023)
- [WildChat: 1M ChatGPT Interaction Logs in the Wild](https://mlsanity.com/paper/2405.01470/) (2024)
- [Kimi K2: Open Agentic Intelligence](https://mlsanity.com/paper/2507.20534/) (2025)
- [Safety Alignment Should Be Made More Than Just a Few Tokens Deep](https://mlsanity.com/paper/2406.05946/) (2024)
- [SafeChain: Safety of Language Models with Long Chain-of-Thought Reasoning Capabilities](https://mlsanity.com/paper/2502.12025/) (2025)
- [Safety Tax: Safety Alignment Makes Your Large Reasoning Models Less Reasonable](https://mlsanity.com/paper/2503.00555/) (2025)
- [Why Should Adversarial Perturbations be Imperceptible? Rethink the Research Paradigm in Adversarial NLP](https://mlsanity.com/paper/2210.10683/) (2022)
- [ALERT: A Comprehensive Benchmark for Assessing Large Language Models' Safety through Red Teaming](https://mlsanity.com/paper/2404.08676/) (2024)
- [STAR-1: Safer Alignment of Reasoning LLMs with 1K Data](https://mlsanity.com/paper/2504.01903/) (2025)
- [Safety in Large Reasoning Models: A Survey](https://mlsanity.com/paper/2504.17704/) (2025)
- [RealSafe-R1: Safety-Aligned DeepSeek-R1 without Compromising Reasoning Capability](https://mlsanity.com/paper/2504.10081/) (2025)
- [FalseReject: A Resource for Improving Contextual Safety and Mitigating Over-Refusals in LLMs via Structured Reasoning](https://mlsanity.com/paper/2505.08054/) (2025)
- [Reasoning as an Adaptive Defense for Safety](https://mlsanity.com/paper/2507.00971/) (2025)
- [AlphaAlign: Incentivizing Safety Alignment with Extremely Simplified Reinforcement Learning](https://mlsanity.com/paper/2507.14987/) (2025)
- [Towards Safe Reasoning in Large Reasoning Models via Corrective Intervention](https://mlsanity.com/paper/2509.24393/) (2025)
- [R1-ACT: Efficient Reasoning Model Safety Alignment by Activating Safety Knowledge](https://mlsanity.com/paper/2508.00324/) (2025)

## Abstract (arXiv)

Safety alignment of large reasoning models (LRMs) via supervised fine-tuning (SFT) and reinforcement learning (RL) often yields near-perfect safety scores, yet this apparent success comes at the cost of severe over-refusal and degraded general capabilities. Through systematic empirical analysis, we find that these failures are closely associated with the learning of spurious shortcuts rather than robust intent-sensitive safety evaluation. Specifically, we identify two dominant shortcuts: formatting shortcuts, where refusal behaviors are overly bound to structural prompt templates that frequently appear in safety alignment corpora; and lexical shortcuts, where sensitive keywords reflexively trigger refusals on benign queries. To mitigate reliance on these shortcuts, we propose DeShortcut-Align, a shortcut-decoupling alignment framework that reduces dependence on superficial cues. DeShortcut-Align operates across three coordinated stages: (1) Refusal Sensitivity Attribution, which masks input tokens to quantify their impact on the final refusal response distribution; (2) Attribution-Guided Contrastive Augmentation, which constructs benign contrastive samples using high-sensitivity tokens to mitigate lexical shortcuts; and (3) Counterfactual Consistency Regularization, which constructs template-ablated states via attention blinding to enforce decision consistency across SFT and RL, mitigating formatting shortcut dependence. Experiments on 7B and 14B models demonstrate that DeShortcut-Align significantly improves robustness against template-stripping bypass attacks (reducing performance drops by up to 72%), substantially reduces over-refusal by over 58%, and better preserves general-purpose reasoning capabilities, thereby mitigating the alignment tax commonly observed in safety training.