# Taming foundation model with invariance-oriented pre-training for broad-spectrum EEG analysis across signal-level, brain-state, and brain-health tasks

arXiv: https://arxiv.org/abs/2608.24597 · HTML: https://mlsanity.com/paper/2608.24597/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 18 of its 54 references that are in the map.
- First posted on arXiv 25 Aug 2026.

## Builds on (most cited first, 18 of 18)

- [Attention Is All You Need](https://mlsanity.com/paper/1706.03762/) (2017)
- [Language Models are Few-Shot Learners](https://mlsanity.com/paper/2005.14165/) (2020)
- [DINOv2: Learning Robust Visual Features without Supervision](https://mlsanity.com/paper/2304.07193/) (2023)
- [Masked Autoencoders Are Scalable Vision Learners](https://mlsanity.com/paper/2111.06377/) (2021)
- [Emerging Properties in Self-Supervised Vision Transformers](https://mlsanity.com/paper/2104.14294/) (2021)
- [Unsupervised Learning of Visual Features by Contrasting Cluster Assignments](https://mlsanity.com/paper/2006.09882/) (2020)
- [EEGNet: A Compact Convolutional Network for EEG-based Brain-Computer Interfaces](https://mlsanity.com/paper/1611.08024/) (2016)
- [Large Brain Model for Learning Generic Representations with Tremendous EEG Data in BCI](https://mlsanity.com/paper/2405.18765/) (2024)
- [CBraMod: A Criss-Cross Brain Foundation Model for EEG Decoding](https://mlsanity.com/paper/2412.07236/) (2024)
- [Transformer-based Spatial-Temporal Feature Learning for EEG Decoding](https://mlsanity.com/paper/2106.11170/) (2021)
- [Transfer Learning for EEG-Based Brain-Computer Interfaces: A Review of Progress Made Since 2016](https://mlsanity.com/paper/2004.06286/) (2020)
- [CSBrain: A Cross-scale Spatiotemporal Brain Foundation Model for EEG Decoding](https://mlsanity.com/paper/2506.23075/) (2025)
- [ICLabel: An automated electroencephalographic independent component classifier, dataset, and website](https://mlsanity.com/paper/1901.07915/) (2019)
- [CodeBrain: Bridging Decoupled Tokenizer and Multi-Scale Architecture for EEG Foundation Model](https://mlsanity.com/paper/2506.09110/) (2025)
- [Uni-NTFM: A Unified Foundation Model for EEG Signal Representation Learning](https://mlsanity.com/paper/2509.24222/) (2025)
- [Human brain distinctiveness based on EEG spectral coherence connectivity](https://mlsanity.com/paper/1403.6384/) (2014)
- [EEG fingerprinting: subject specific signature based on the aperiodic component of power spectrum](https://mlsanity.com/paper/2001.09424/) (2020)
- [Evidence of Task-Independent Person-Specific Signatures in EEG using Subspace Techniques](https://mlsanity.com/paper/2007.13517/) (2020)

## Abstract (arXiv)

Electroencephalography (EEG) is a widely used window into human brain function, but most EEG models remain tied to a one-dataset-one-model supervised paradigm. Recent EEG foundation models offer a route toward reusable representations, but most remain reconstruction-centered, assuming that EEG content predictable from local context is necessarily transferable neural information. Here we present INCEPT, an invariance-oriented EEG foundation model trained on over 11,000 hours of unlabelled clinical EEG. Rather than prioritizing signal recovery alone, INCEPT learns representation-level stability across correlated EEG observations, separating stable neural structure and essential subject-sensitive information from the nuisance variability that dominates scalp recordings while preserving subject-, state- and condition-discriminative information. We evaluate INCEPT on a broad-spectrum benchmark of ten datasets spanning three levels of post-acquisition EEG analysis: signal-level assessment, brain-state decoding, and brain-health evaluation. INCEPT ranks first among recent EEG foundation models on 26 of 30 linear-probing metrics and 24 of 30 fine-tuning metrics, and also surpasses strong task-specific specialist encoders across diverse downstream settings. Objective ablations and representation analyses further show that invariance-oriented pre-training improves transfer and organizes subject-sensitive neural representations beyond reconstruction alone. These results establish invariance learning as a promising principle for building reusable EEG foundation models.