# AutoSchema: Live Schema Grounding for Agentic Text-to-Sparql over Heterogeneous Knowledge Graphs

arXiv: https://arxiv.org/abs/2608.14228 · HTML: https://mlsanity.com/paper/2608.14228/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use.
- Builds on 12 of its 45 references that are in the map.
- First posted on arXiv 14 Aug 2026.

## Placed in

- LLM agents and tool use / [Medical and scientific domain agents](https://mlsanity.com/agents/medical-and-scientific-domain-agents/)

## Builds on (most cited first, 12 of 12)

- [The Web as a Knowledge-base for Answering Complex Questions](https://mlsanity.com/paper/1803.06643/) (2018)
- [StructGPT: A General Framework for Large Language Model to Reason over Structured Data](https://mlsanity.com/paper/2305.09645/) (2023)
- [Think-on-Graph: Deep and Responsible Reasoning of Large Language Model on Knowledge Graph](https://mlsanity.com/paper/2307.07697/) (2023)
- [A Survey on Complex Knowledge Base Question Answering: Methods, Challenges and Solutions](https://mlsanity.com/paper/2105.11644/) (2021)
- [TIARA: Multi-grained Retrieval for Robust Question Answering over Large Knowledge Bases](https://mlsanity.com/paper/2210.12925/) (2022)
- [LLM-based SPARQL Query Generation from Natural Language over Federated Knowledge Graphs](https://mlsanity.com/paper/2410.06062/) (2024)
- [Knowledge Graph Question Answering Leaderboard: A Community Resource to Prevent a Replication Crisis](https://mlsanity.com/paper/2201.08174/) (2022)
- [Knowledge Graph Question Answering Datasets and Their Generalizability: Are They Enough for Future Research?](https://mlsanity.com/paper/2205.06573/) (2022)
- [Beyond Seen Data: Improving KBQA Generalization Through Schema-Guided Logical Form Generation](https://mlsanity.com/paper/2502.12737/) (2025)
- [Do I have the Knowledge to Answer? Investigating Answerability of Knowledge Base Questions](https://mlsanity.com/paper/2212.10189/) (2022)
- [RetinaQA: A Robust Knowledge Base Question Answering Model for both Answerable and Unanswerable Questions](https://mlsanity.com/paper/2403.10849/) (2024)
- [BioGraphletQA: Knowledge-Anchored Generation of Complex QA Datasets](https://mlsanity.com/paper/2604.26048/) (2026)

## Abstract (arXiv)

Life science knowledge graphs make large collections of structured data available through SPARQL, but each resource uses its own schema, identifiers, and links. TogoMCP helps language model agents query these resources by providing curated Metadata Interoperability Exchange files. Creating and maintaining these files still requires language model assisted drafting, validation, and manual review. We study live schema grounding, where an agent obtains the schema evidence needed for a question directly from the current endpoints. We present textscautoschema, a general framework for live schema grounding that requires no training. It inspects live schemas, maps entity names in a question to graph identifiers, explores relation paths, and finds possible connections between resources during iterative query construction. We use TogoMCP as our main comparison framework. We evaluate textscautoschema on Resource Focused Biomedical KGQA, Multi Resource Biomedical KGQA, Longitudinal Biomedical Semantic QA over BioASQ Task B, and Chemistry Knowledge Graph Transfer to a previously undocumented RDF graph. textscautoschema improves mean factoid accuracy over TogoMCP in the biomedical KGQA tasks and gives consistent gains in the longitudinal BioASQ evaluation. It also reduces iteration budget exhaustion and uses fewer tool calls on average in the core evaluation. The transfer study gives preliminary evidence that live schema grounding can support irregular and previously unseen graphs without first creating a curated schema file.