# CASE: Causal Alignment and Structural Enforcement for Improving Chain-of-Thought Faithfulness

arXiv: https://arxiv.org/abs/2607.18820 · HTML: https://mlsanity.com/paper/2607.18820/

## Key facts

- Cited by 2 papers in the map (data through 14 Oct 2026).
- Placed in Prompting and chain-of-thought reasoning, one of 17 directions in LLM reasoning.
- Builds on 6 of its 26 references that are in the map.
- First posted on arXiv 21 Jul 2026.

## Placed in

- LLM reasoning / [Prompting and chain-of-thought reasoning](https://mlsanity.com/lr/prompting-and-chain-of-thought-reasoning/)
- Mechanistic interpretability / [Steering and interpreting LLM reasoning](https://mlsanity.com/mechinterp/steering-and-interpreting-llm-reasoning/)

## Builds on (most cited first, 6 of 6)

- [Qwen3 Technical Report](https://mlsanity.com/paper/2505.09388/) (2025)
- [DeepSeek-R1: Incentivizing Reasoning Capability in LLMs via Reinforcement Learning](https://mlsanity.com/paper/2501.12948/) (2025)
- [Think you have Solved Question Answering? Try ARC, the AI2 Reasoning Challenge](https://mlsanity.com/paper/1803.05457/) (2018)
- [DeepSeek-V3 Technical Report](https://mlsanity.com/paper/2412.19437/) (2024)
- [Measuring Faithfulness in Chain-of-Thought Reasoning](https://mlsanity.com/paper/2307.13702/) (2023)
- [On the Hardness of Faithful Chain-of-Thought Reasoning in Large Language Models](https://mlsanity.com/paper/2406.10625/) (2024)

## Built on by (most cited first, 2 of 2)

- [Reasoning Models Are Accurate but Unsound on Identification](https://mlsanity.com/paper/2610.03519/) (2026)
- [Hallucination Across the Reasoning Lifecycle: Interface Visibility, Causal Evidence, and Release Control in Large Reasoning Models](https://mlsanity.com/paper/2610.05472/) (2026)

## Abstract (arXiv)

Chain-of-thought (CoT) reasoning is widely used to improve both the performance and interpretability of large language models (LLMs), yet the generated reasoning may not faithfully support the final answer. We study this problem from a causal perspective, where a faithful CoT process should follow the chain Zrightarrow Xrightarrow Y, with Z, X, and Y denoting the instruction, reasoning chain, and final answer, respectively. In this process, the instruction should affect the answer only through the reasoning chain. However, conventional autoregressive LLMs condition answer generation on both the instruction and the CoT, which still allows a direct instruction-to-answer shortcut. To address this issue, we propose CASE, a framework that combines training-time causal alignment and inference-time structural enforcement. During training, CASE builds counterfactual-CoT, biased-instruction, and empty-instruction datasets, and applies selective-loss fine-tuning to strengthen CoT-to-answer dependence while suppressing instruction shortcuts. During inference, CASE masks direct attention from instruction tokens to answer tokens, preventing the model from bypassing the generated CoT. We provide an information-theoretic analysis showing how these components promote faithful chains. Experiments on three models and four benchmarks show that CASE achieves a 37% average per-setting relative improvement in overall CoT faithfulness over the strongest baselines, exhibits stronger cross-dataset faithfulness transfer, and maintains competitive average accuracy. Code is available at https://github.com/oddwang/CASE.