# Where Do CoT Training Gains Land in LLM based Agents?

arXiv: https://arxiv.org/abs/2606.26935 · HTML: https://mlsanity.com/paper/2606.26935/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Placed in Prompting and chain-of-thought reasoning, one of 17 directions in LLM reasoning.
- Builds on 11 of its 25 references that are in the map.
- First posted on arXiv 25 Jun 2026.

## Placed in

- LLM reasoning / [Prompting and chain-of-thought reasoning](https://mlsanity.com/lr/prompting-and-chain-of-thought-reasoning/)
- LLM agents and tool use / [General LLM agent frameworks and benchmarks](https://mlsanity.com/agents/general-llm-agent-frameworks-and-benchmarks/)

## Builds on (most cited first, 11 of 11)

- [Direct Preference Optimization: Your Language Model is Secretly a Reward Model](https://mlsanity.com/paper/2305.18290/) (2023)
- [ALFWorld: Aligning Text and Embodied Environments for Interactive Learning](https://mlsanity.com/paper/2010.03768/) (2020)
- [Language Models Don't Always Say What They Think: Unfaithful Explanations in Chain-of-Thought Prompting](https://mlsanity.com/paper/2305.04388/) (2023)
- [SFT Memorizes, RL Generalizes: A Comparative Study of Foundation Model Post-training](https://mlsanity.com/paper/2501.17161/) (2025)
- [AgentTuning: Enabling Generalized Agent Abilities for LLMs](https://mlsanity.com/paper/2310.12823/) (2023)
- [CodeAgent: Enhancing Code Generation with Tool-Integrated Agent Systems for Real-World Repo-level Coding Challenges](https://mlsanity.com/paper/2401.07339/) (2024)
- [DigiRL: Training In-The-Wild Device-Control Agents with Autonomous Reinforcement Learning](https://mlsanity.com/paper/2406.11896/) (2024)
- [RLVMR: Reinforcement Learning with Verifiable Meta-Reasoning Rewards for Robust Long-Horizon Agents](https://mlsanity.com/paper/2507.22844/) (2025)
- [MARFT: Multi-Agent Reinforcement Fine-Tuning](https://mlsanity.com/paper/2504.16129/) (2025)
- [RL Fine-Tuning Heals OOD Forgetting in SFT](https://mlsanity.com/paper/2509.12235/) (2025)
- [Gradient Coupling: The Hidden Barrier to Generalization in Agentic Reinforcement Learning](https://mlsanity.com/paper/2509.23870/) (2025)

## Abstract (arXiv)

Chain-of-thought (CoT) reasoning is widely used in language-model agents, but prior work has shown that verbalized CoT is not always faithful and may instead reflect post-hoc reasoning, which means the model already knows the answer before reasoning. We therefore ask what CoT training is actually improving: is the model getting better at changing its action through generated reasoning, or is it getting better at predicting the action directly from the prompt? We study this question by comparing prompt actions (predicting action without CoT) with CoT actions (predicting action with CoT). Across checkpoints, prompt-action quality improves substantially. While interacting with the environment, the relative advantage of CoT actions over prompt actions remains similar, showing that CoT training does not widen the advantage of CoT reasoning, and it helps to improve the quality of prompt actions. We further find that later checkpoints are less likely to revise the action in response to CoT, suggesting greater reliance on the prompt. Motivated by these patterns, we selectively mask action-token supervision on a fraction of training examples. This intervention improves out-of-domain generalization.