# CompactAttention: Accelerating Chunked Prefill with Block-Union KV Selection

arXiv: https://arxiv.org/abs/2605.16839 · HTML: https://mlsanity.com/paper/2605.16839/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 26 of its 28 references that are in the map.
- First posted on arXiv 16 May 2026.

## Builds on (most cited first, 26 of 26)

- [The Llama 3 Herd of Models](https://mlsanity.com/paper/2407.21783/) (2024)
- [Qwen3 Technical Report](https://mlsanity.com/paper/2505.09388/) (2025)
- [Efficient Memory Management for Large Language Model Serving with PagedAttention](https://mlsanity.com/paper/2309.06180/) (2023)
- [FlashAttention: Fast and Memory-Efficient Exact Attention with IO-Awareness](https://mlsanity.com/paper/2205.14135/) (2022)
- [FlashAttention-2: Faster Attention with Better Parallelism and Work Partitioning](https://mlsanity.com/paper/2307.08691/) (2023)
- [GQA: Training Generalized Multi-Query Transformer Models from Multi-Head Checkpoints](https://mlsanity.com/paper/2305.13245/) (2023)
- [RULER: What's the Real Context Size of Your Long-Context Language Models?](https://mlsanity.com/paper/2404.06654/) (2024)
- [SGLang: Efficient Execution of Structured Language Model Programs](https://mlsanity.com/paper/2312.07104/) (2023)
- [DeepSeek-V4: Towards Highly Efficient Million-Token Context Intelligence](https://mlsanity.com/paper/2606.19348/) (2026)
- [OpenAI GPT-5 System Card](https://mlsanity.com/paper/2601.03267/) (2025)
- [SnapKV: LLM Knows What You are Looking for Before Generation](https://mlsanity.com/paper/2404.14469/) (2024)
- [Taming Throughput-Latency Tradeoff in LLM Inference with Sarathi-Serve](https://mlsanity.com/paper/2403.02310/) (2024)
- [FlashAttention-3: Fast and Accurate Attention with Asynchrony and Low-precision](https://mlsanity.com/paper/2407.08608/) (2024)
- [Quest: Query-Aware Sparsity for Efficient Long-Context LLM Inference](https://mlsanity.com/paper/2406.10774/) (2024)
- [Kimi K2.5: Visual Agentic Intelligence](https://mlsanity.com/paper/2602.02276/) (2026)
- [Native Sparse Attention: Hardware-Aligned and Natively Trainable Sparse Attention](https://mlsanity.com/paper/2502.11089/) (2025)
- [MInference 1.0: Accelerating Pre-filling for Long-Context LLMs via Dynamic Sparse Attention](https://mlsanity.com/paper/2407.02490/) (2024)
- [LongBench v2: Towards Deeper Understanding and Reasoning on Realistic Long-context Multitasks](https://mlsanity.com/paper/2412.15204/) (2024)
- [FlashInfer: Efficient and Customizable Attention Engine for LLM Inference Serving](https://mlsanity.com/paper/2501.01005/) (2025)
- [MoBA: Mixture of Block Attention for Long-Context LLMs](https://mlsanity.com/paper/2502.13189/) (2025)
- [SARATHI: Efficient LLM Inference by Piggybacking Decodes with Chunked Prefills](https://mlsanity.com/paper/2308.16369/) (2023)
- [XAttention: Block Sparse Attention with Antidiagonal Scoring](https://mlsanity.com/paper/2503.16428/) (2025)
- [SeerAttention: Learning Intrinsic Sparse Attention in Your LLMs](https://mlsanity.com/paper/2410.13276/) (2024)
- [FlexPrefill: A Context-Aware Sparse Attention Mechanism for Efficient Long-Sequence Inference](https://mlsanity.com/paper/2502.20766/) (2025)
- [FlashPrefill: Instantaneous Pattern Discovery and Thresholding for Ultra-Fast Long-Context Prefilling](https://mlsanity.com/paper/2603.06199/) (2026)
- [QUOKA: Query-Oriented KV Selection For Efficient LLM Prefill](https://mlsanity.com/paper/2602.08722/) (2026)

## Abstract (arXiv)

Chunked prefill has become a widely adopted serving strategy for long-context large language models, but efficient attention computation in this regime remains challenging. Existing sparse attention methods are primarily designed for one-shot prefill and do not translate efficiently to chunked prefill: block-sparse kernels lose efficiency when the query length is limited by the chunk size, while fine-grained pattern search becomes costly when repeated over the accumulated KV cache at every chunk. QUOKA, a recent method that directly targets chunked prefill, avoids sparse-kernel overhead but relies on query-subsampled, token-level KV selection, which can miss query-specific KV entries and introduce explicit KV-copy overhead. To address these limitations, we propose CompactAttention, a chunked-prefill attention mechanism based on Block-Union KV Selection. CompactAttention treats 2D block-sparse masks as KV-selection signals rather than direct sparse-kernel execution plans, and converts them into GQA-aware per-group KV block tables through Q-block union and intra-group union. This construction produces the minimal block tables that preserve all KV blocks selected by the input masks under paged execution constraints, enabling selected KV blocks to be accessed in place without explicit KV compaction. On LLaMA-3.1-8B-Instruct, CompactAttention maintains accuracy close to dense attention on the RULER benchmark while delivering up to 2.72× attention speedup at 128K context length under chunked prefill.