# Learning to Synergize Semantic and Geometric Priors for Limited-Data Wheat Disease Segmentation

arXiv: https://arxiv.org/abs/2604.05415 · HTML: https://mlsanity.com/paper/2604.05415/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 14 of its 33 references that are in the map.
- First posted on arXiv 7 Apr 2026.

## Builds on (most cited first, 14 of 14)

- [Adam: A Method for Stochastic Optimization](https://mlsanity.com/paper/1412.6980/) (2014)
- [DINOv2: Learning Robust Visual Features without Supervision](https://mlsanity.com/paper/2304.07193/) (2023)
- [Emerging Properties in Self-Supervised Vision Transformers](https://mlsanity.com/paper/2104.14294/) (2021)
- [SegFormer: Simple and Efficient Design for Semantic Segmentation with Transformers](https://mlsanity.com/paper/2105.15203/) (2021)
- [Masked-attention Mask Transformer for Universal Image Segmentation](https://mlsanity.com/paper/2112.01527/) (2021)
- [AdaptFormer: Adapting Vision Transformers for Scalable Visual Recognition](https://mlsanity.com/paper/2205.13535/) (2022)
- [DenseCLIP: Language-Guided Dense Prediction with Context-Aware Prompting](https://mlsanity.com/paper/2112.01518/) (2021)
- [SegNeXt: Rethinking Convolutional Attention Design for Semantic Segmentation](https://mlsanity.com/paper/2209.08575/) (2022)
- [Matcher: Segment Anything with One Shot Using All-Purpose Feature Matching](https://mlsanity.com/paper/2305.13310/) (2023)
- [SurgicalSAM: Efficient Class Promptable Surgical Instrument Segmentation](https://mlsanity.com/paper/2308.08746/) (2023)
- [VRP-SAM: SAM with Visual Reference Prompt](https://mlsanity.com/paper/2402.17726/) (2024)
- [Global Wheat Head Detection (GWHD) dataset: a large and diverse dataset of high resolution RGB labelled images to develop and benchmark wheat head detection methods](https://mlsanity.com/paper/2005.02162/) (2020)
- [Augment to Segment: Tackling Pixel-Level Imbalance in Wheat Disease and Pest Segmentation](https://mlsanity.com/paper/2509.09961/) (2025)
- [Class-Incremental Learning of Plant and Disease Detection: Growing Branches with Knowledge Distillation](https://mlsanity.com/paper/2304.06619/) (2023)

## Abstract (arXiv)

Wheat disease segmentation is fundamental to precision agriculture but faces severe challenges from significant intra-class temporal variations across growth stages. Such substantial appearance shifts make collecting a representative dataset for training from scratch both labor-intensive and impractical. To address this, we propose SGPer, a Semantic-Geometric Prior Synergization framework that treats wheat disease segmentation under limited data as a coupled task of disease-specific semantic perception and disease boundary localization. Our core insight is that pretrained DINOv2 provides robust category-aware semantic priors to handle appearance shifts, which can be converted into coarse spatial prompts to guide SAM for the precise localization of disease boundaries. Specifically, SGPer designs disease-sensitive adapters with multiple disease-friendly filters and inserts them into both DINOv2 and SAM to align their pretrained representations with disease-specific characteristics. To operationalize this synergy, SGPer transforms DINOv2-derived features into dense, category-specific point prompts to ensure comprehensive spatial coverage of all disease regions. To subsequently eliminate prompt redundancy and ensure highly accurate mask generation, it dynamically filters these dense candidates by cross-referencing SAM's iterative mask confidence with the category-specific semantic consistency derived from DINOv2. Ultimately, SGPer distills a highly informative set of prompts to activate SAM's geometric priors, achieving precise and robust segmentation that remains strictly invariant to temporal appearance changes. Extensive evaluations demonstrate that SGPer consistently achieves state-of-the-art performance on wheat disease and organ segmentation benchmarks, especially in data-constrained scenarios.