# CS-MUNet: A Channel-Spatial Dual-Stream Mamba Network for Multi-Organ Segmentation

arXiv: https://arxiv.org/abs/2603.19659 · HTML: https://mlsanity.com/paper/2603.19659/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Placed in Mamba for medical image analysis, one of 10 directions in State-space sequence models (S4, Mamba).
- Builds on 35 of its 44 references that are in the map.
- First posted on arXiv 20 Mar 2026.

## Placed in

- State-space sequence models (S4, Mamba) / [Mamba for medical image analysis](https://mlsanity.com/ssm/mamba-for-medical-image-analysis/)

## Builds on (most cited first, 30 of 35)

- [U-Net: Convolutional Networks for Biomedical Image Segmentation](https://mlsanity.com/paper/1505.04597/) (2015)
- [Squeeze-and-Excitation Networks](https://mlsanity.com/paper/1709.01507/) (2017)
- [Mamba: Linear-Time Sequence Modeling with Selective State Spaces](https://mlsanity.com/paper/2312.00752/) (2023)
- [V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation](https://mlsanity.com/paper/1606.04797/) (2016)
- [UNet++: A Nested U-Net Architecture for Medical Image Segmentation](https://mlsanity.com/paper/1807.10165/) (2018)
- [Attention U-Net: Learning Where to Look for the Pancreas](https://mlsanity.com/paper/1804.03999/) (2018)
- [Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation](https://mlsanity.com/paper/2105.05537/) (2021)
- [A Survey on Deep Learning in Medical Image Analysis](https://mlsanity.com/paper/1702.05747/) (2017)
- [Vision Mamba: Efficient Visual Representation Learning with Bidirectional State Space Model](https://mlsanity.com/paper/2401.09417/) (2024)
- [VMamba: Visual State Space Model](https://mlsanity.com/paper/2401.10166/) (2024)
- [Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Images](https://mlsanity.com/paper/2201.01266/) (2022)
- [Network Dissection: Quantifying Interpretability of Deep Visual Representations](https://mlsanity.com/paper/1704.05796/) (2017)
- [ECA-Net: Efficient Channel Attention for Deep Convolutional Neural Networks](https://mlsanity.com/paper/1910.03151/) (2019)
- [U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation](https://mlsanity.com/paper/2401.04722/) (2024)
- [UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentation](https://mlsanity.com/paper/2004.08790/) (2020)
- [VM-UNet: Vision Mamba UNet for Medical Image Segmentation](https://mlsanity.com/paper/2402.02491/) (2024)
- [SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation](https://mlsanity.com/paper/2401.13560/) (2024)
- [AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?](https://mlsanity.com/paper/2010.14808/) (2020)
- [Swin-UMamba: Mamba-based UNet with ImageNet-based pretraining](https://mlsanity.com/paper/2402.03302/) (2024)
- [Mamba-UNet: UNet-Like Pure Visual Mamba for Medical Image Segmentation](https://mlsanity.com/paper/2402.05079/) (2024)
- [LightM-UNet: Mamba Assists in Lightweight UNet for Medical Image Segmentation](https://mlsanity.com/paper/2403.05246/) (2024)
- [EGE-UNet: an Efficient Group Enhanced UNet for skin lesion segmentation](https://mlsanity.com/paper/2307.08473/) (2023)
- [Vivim: a Video Vision Mamba for Medical Video Segmentation](https://mlsanity.com/paper/2401.14168/) (2024)
- [nnMamba: 3D Biomedical Image Segmentation, Classification and Landmark Detection with State Space Model](https://mlsanity.com/paper/2402.03526/) (2024)
- [UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation](https://mlsanity.com/paper/2403.20035/) (2024)
- [VM-UNET-V2 Rethinking Vision Mamba UNet for Medical Image Segmentation](https://mlsanity.com/paper/2403.09157/) (2024)
- [H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation](https://mlsanity.com/paper/2403.13642/) (2024)
- [Weak-Mamba-UNet: Visual Mamba Makes CNN and ViT Work Better for Scribble-based Medical Image Segmentation](https://mlsanity.com/paper/2402.10887/) (2024)
- [P-Mamba: Marrying Perona Malik Diffusion with Mamba for Efficient Pediatric Echocardiographic Left Ventricular Segmentation](https://mlsanity.com/paper/2402.08506/) (2024)
- [Boundary-aware Context Neural Network for Medical Image Segmentation](https://mlsanity.com/paper/2005.00966/) (2020)

## Abstract (arXiv)

Recently Mamba-based methods have shown promise in abdominal organ segmentation. However, existing approaches neglect cross-channel anatomical semantic collaboration and lack explicit boundary-aware feature fusion mechanisms. To address these limitations, we propose CS-MUNet with two purpose-built modules. The Boundary-Aware State Mamba module employs a Bayesian-attention framework to generate pixel-level boundary posterior maps, injected directly into Mamba's core scan parameters to embed boundary awareness into the SSM state transition mechanism, while dual-branch weight allocation enables complementary modulation between global and local structural representations. The Channel Mamba State Aggregation module redefines the channel dimension as the SSM sequence dimension to explicitly model cross-channel anatomical semantic collaboration in a data-driven manner. Experiments on two public benchmarks demonstrate that CS-MUNet consistently outperforms state-of-the-art methods across multiple metrics, establishing a new SSM modeling paradigm that jointly addresses channel semantic collaboration and boundary-aware feature fusion for abdominal multi-organ segmentation.