# Training-Free Cross-Architecture Merging for Graph Neural Networks

arXiv: https://arxiv.org/abs/2602.19332 · HTML: https://mlsanity.com/paper/2602.19332/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 33 of its 46 references that are in the map.
- First posted on arXiv 22 Feb 2026.

## Builds on (most cited first, 30 of 33)

- [Semi-Supervised Classification with Graph Convolutional Networks](https://mlsanity.com/paper/1609.02907/) (2016)
- [Graph Attention Networks](https://mlsanity.com/paper/1710.10903/) (2017)
- [Inductive Representation Learning on Large Graphs](https://mlsanity.com/paper/1706.02216/) (2017)
- [How Powerful are Graph Neural Networks?](https://mlsanity.com/paper/1810.00826/) (2018)
- [Neural Message Passing for Quantum Chemistry](https://mlsanity.com/paper/1704.01212/) (2017)
- [Open Graph Benchmark: Datasets for Machine Learning on Graphs](https://mlsanity.com/paper/2005.00687/) (2020)
- [Similarity of Neural Network Representations Revisited](https://mlsanity.com/paper/1905.00414/) (2019)
- [Model soups: averaging weights of multiple fine-tuned models improves accuracy without increasing inference time](https://mlsanity.com/paper/2203.05482/) (2022)
- [Averaging Weights Leads to Wider Optima and Better Generalization](https://mlsanity.com/paper/1803.05407/) (2018)
- [Editing Models with Task Arithmetic](https://mlsanity.com/paper/2212.04089/) (2022)
- [Revisiting Semi-Supervised Learning with Graph Embeddings](https://mlsanity.com/paper/1603.08861/) (2016)
- [Geom-GCN: Geometric Graph Convolutional Networks](https://mlsanity.com/paper/2002.05287/) (2020)
- [TIES-Merging: Resolving Interference When Merging Models](https://mlsanity.com/paper/2306.01708/) (2023)
- [Language Models are Super Mario: Absorbing Abilities from Homologous Models as a Free Lunch](https://mlsanity.com/paper/2311.03099/) (2023)
- [Merging Models with Fisher-Weighted Averaging](https://mlsanity.com/paper/2111.09832/) (2021)
- [GraphSAINT: Graph Sampling Based Inductive Learning Method](https://mlsanity.com/paper/1907.04931/) (2019)
- [Federated Learning with Matched Averaging](https://mlsanity.com/paper/2002.06440/) (2020)
- [Git Re-Basin: Merging Models modulo Permutation Symmetries](https://mlsanity.com/paper/2209.04836/) (2022)
- [Dataless Knowledge Fusion by Merging Weights of Language Models](https://mlsanity.com/paper/2212.09849/) (2022)
- [A critical look at the evaluation of GNNs under heterophily: Are we really making progress?](https://mlsanity.com/paper/2302.11640/) (2023)
- [The Role of Permutation Invariance in Linear Mode Connectivity of Neural Networks](https://mlsanity.com/paper/2110.06296/) (2021)
- [AdaMerging: Adaptive Model Merging for Multi-Task Learning](https://mlsanity.com/paper/2310.02575/) (2023)
- [Understanding image representations by measuring their equivariance and equivalence](https://mlsanity.com/paper/1411.5908/) (2014)
- [Model Fusion via Optimal Transport](https://mlsanity.com/paper/1910.05653/) (2019)
- [Revisiting Model Stitching to Compare Neural Representations](https://mlsanity.com/paper/2106.07682/) (2021)
- [ZipIt! Merging Models from Different Tasks without Training](https://mlsanity.com/paper/2305.03053/) (2023)
- [REPAIR: REnormalizing Permuted Activations for Interpolation Repair](https://mlsanity.com/paper/2211.08403/) (2022)
- [Parameter Competition Balancing for Model Merging](https://mlsanity.com/paper/2410.02396/) (2024)
- [Training-Free Pretrained Model Merging](https://mlsanity.com/paper/2403.01753/) (2024)
- [Stochastic Weight Averaging Revisited](https://mlsanity.com/paper/2201.00519/) (2022)

## Abstract (arXiv)

Model merging has emerged as a powerful paradigm for combining the capabilities of distinct expert models without the high computational cost of retraining, yet current methods are fundamentally constrained to homogeneous architectures. For GNNs, however, message passing is topology-dependent and sensitive to misalignment, making direct parameter-space merging unreliable. To bridge this gap, we introduce H-GRAMA (Heterogeneous Graph Routing and Message Alignment), a training-free framework that lifts merging from parameter space to operator space. We formalize Universal Message Passing Mixture (UMPM), a shared operator family that expresses heterogeneous GNN layers in a common functional language. H-GRAMA enables cross-architecture GNN merging (e.g., GCN to GAT) without retraining, retaining high specialist accuracy in most cases in compatible depth settings and achieving inference speedups of 1.2x to 1.9x over ensembles.