# Self-Supervised Animal Identification for Long Videos

arXiv: https://arxiv.org/abs/2601.09663 · HTML: https://mlsanity.com/paper/2601.09663/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 6 of its 7 references that are in the map.
- First posted on arXiv 14 Jan 2026.

## Builds on (most cited first, 6 of 6)

- [Learning Transferable Visual Models From Natural Language Supervision](https://mlsanity.com/paper/2103.00020/) (2021)
- [A Simple Framework for Contrastive Learning of Visual Representations](https://mlsanity.com/paper/2002.05709/) (2020)
- [Momentum Contrast for Unsupervised Visual Representation Learning](https://mlsanity.com/paper/1911.05722/) (2019)
- [Sigmoid Loss for Language Image Pre-Training](https://mlsanity.com/paper/2303.15343/) (2023)
- [3D-POP -- An automated annotation approach to facilitate markerless 2D-3D tracking of freely moving birds with marker-based motion capture](https://mlsanity.com/paper/2303.13174/) (2023)
- [Contrastive Learning for Multi-Object Tracking with Transformers](https://mlsanity.com/paper/2311.08043/) (2023)

## Abstract (arXiv)

Identifying individual animals in long-duration videos is essential for behavioral ecology, wildlife monitoring, and livestock management. Traditional methods require extensive manual annotation, while existing self-supervised approaches are computationally demanding and ill-suited for long sequences due to memory constraints and temporal error propagation. We introduce a highly efficient, self-supervised method that reframes animal identification as a global clustering task rather than a sequential tracking problem. Our approach assumes a known, fixed number of individuals within a single video -- a common scenario in practice -- and requires only bounding box detections and the total count. By sampling pairs of frames, using a frozen pre-trained backbone, and employing a self-bootstrapping mechanism with the Hungarian algorithm for in-batch pseudo-label assignment, our method learns discriminative features without identity labels. We adapt a Binary Cross Entropy loss from vision-language models, enabling state-of-the-art accuracy (>97%) while consuming less than 1 GB of GPU memory per batch -- an order of magnitude less than standard contrastive methods. Evaluated on challenging real-world datasets (3D-POP pigeons and 8-calves feeding videos), our framework matches or surpasses supervised baselines trained on over 1,000 labeled frames, effectively removing the manual annotation bottleneck. This work enables practical, high-accuracy animal identification on consumer-grade hardware, with broad applicability in resource-constrained research settings. All code written for this paper are hrefhttps://huggingface.co/datasets/tonyFang04/8-calveshere.