# ReFRM3D: A Radiomics-enhanced Fused Residual Multiparametric 3D Network with Multi-Scale Feature Fusion for Glioma Characterization

arXiv: https://arxiv.org/abs/2512.22570 · HTML: https://mlsanity.com/paper/2512.22570/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 25 of its 95 references that are in the map.
- First posted on arXiv 27 Dec 2025.

## Builds on (most cited first, 25 of 25)

- [TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation](https://mlsanity.com/paper/2102.04306/) (2021)
- [3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation](https://mlsanity.com/paper/1606.06650/) (2016)
- [Attention U-Net: Learning Where to Look for the Pancreas](https://mlsanity.com/paper/1804.03999/) (2018)
- [UNETR: Transformers for 3D Medical Image Segmentation](https://mlsanity.com/paper/2103.10504/) (2021)
- [Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Images](https://mlsanity.com/paper/2201.01266/) (2022)
- [The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification](https://mlsanity.com/paper/2107.02314/) (2021)
- [Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge](https://mlsanity.com/paper/1811.02629/) (2018)
- [Segment Anything Model for Medical Image Analysis: an Experimental Study](https://mlsanity.com/paper/2304.10517/) (2023)
- [SegDiff: Image Segmentation with Diffusion Probabilistic Models](https://mlsanity.com/paper/2112.00390/) (2021)
- [TransBTS: Multimodal Brain Tumor Segmentation Using Transformer](https://mlsanity.com/paper/2103.04430/) (2021)
- [nnU-Net Revisited: A Call for Rigorous Validation in 3D Medical Image Segmentation](https://mlsanity.com/paper/2404.09556/) (2024)
- [Medical Image Segmentation Review: The success of U-Net](https://mlsanity.com/paper/2211.14830/) (2022)
- [MedSegDiff: Medical Image Segmentation with Diffusion Probabilistic Model](https://mlsanity.com/paper/2211.00611/) (2022)
- [MedNeXt: Transformer-driven Scaling of ConvNets for Medical Image Segmentation](https://mlsanity.com/paper/2303.09975/) (2023)
- [MedSegDiff-V2: Diffusion based Medical Image Segmentation with Transformer](https://mlsanity.com/paper/2301.11798/) (2023)
- [nnU-Net for Brain Tumor Segmentation](https://mlsanity.com/paper/2011.00848/) (2020)
- [KiU-Net: Overcomplete Convolutional Architectures for Biomedical Image and Volumetric Segmentation](https://mlsanity.com/paper/2010.01663/) (2020)
- [CKD-TransBTS: Clinical Knowledge-Driven Hybrid Transformer with Modality-Correlated Cross-Attention for Brain Tumor Segmentation](https://mlsanity.com/paper/2207.07370/) (2022)
- [Inter-slice Context Residual Learning for 3D Medical Image Segmentation](https://mlsanity.com/paper/2011.14155/) (2020)
- [3D AGSE-VNet: An Automatic Brain Tumor MRI Data Segmentation Framework](https://mlsanity.com/paper/2107.12046/) (2021)
- [SmaRT: Style-Modulated Robust Test-Time Adaptation for Cross-Domain Brain Tumor Segmentation in MRI](https://mlsanity.com/paper/2509.17925/) (2025)
- [DRBD-Mamba for Robust and Efficient Brain Tumor Segmentation with Analytical Insights](https://mlsanity.com/paper/2510.14383/) (2025)
- [Deep and Statistical Learning in Biomedical Imaging: State of the Art in 3D MRI Brain Tumor Segmentation](https://mlsanity.com/paper/2103.05529/) (2021)
- [Brain Tumor Segmentation Based on Deep Learning, Attention Mechanisms, and Energy-Based Uncertainty Prediction](https://mlsanity.com/paper/2401.00587/) (2023)
- [Resource-Efficient Glioma Segmentation on Sub-Saharan MRI](https://mlsanity.com/paper/2509.09469/) (2025)

## Abstract (arXiv)

Gliomas are among the most aggressive cancers, with complex diagnostic processes. Existing glioma segmentation methods often struggle with high variability in imaging data and inadequate optimization. Furthermore, radiomic analysis is typically applied only after segmentation is finished, limiting its ability to inform the segmentation process itself. To address these challenges, we propose a novel radiomics-enhanced fused residual multiparametric 3D network (ReFRM3D) for brain tumor characterization. The framework is based on a 3D U-Net architecture and features multi-scale feature fusion, hybrid upsampling, and an extended residual skip mechanism. Additionally, we introduce a radiomic conditioning mechanism that extracts texture and intensity descriptors from an intermediate coarse segmentation and re-injects them into the decoder to refine the final output. Experimental results on BraTS2019, BraTS2020, and BraTS2021 show strong performance, with mean DSC values of 93.45%, 93.61%, and 92.06%, respectively, across whole tumor, enhancing tumor, and tumor core regions. Compared with recent models, ReFRM3D improves average DSC by 5.79%, 7.25%, and 0.96% on these datasets. Our model also generalized well on the BraTS-Africa dataset with an average DSC of 87.8%, despite differences in scanner field strength and patient demographics.