# From Cheap Geometry to Expensive Physics: Elevating Neural Operators via Latent Shape Pretraining

arXiv: https://arxiv.org/abs/2509.25788 · HTML: https://mlsanity.com/paper/2509.25788/

## Key facts

- Cited by 1 papers in the map (data through 14 Oct 2026).
- Builds on 27 of its 36 references that are in the map.
- First posted on arXiv 30 Sep 2025.

## Builds on (most cited first, 27 of 27)

- [BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding](https://mlsanity.com/paper/1810.04805/) (2018)
- [An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale](https://mlsanity.com/paper/2010.11929/) (2020)
- [Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformer](https://mlsanity.com/paper/1910.10683/) (2019)
- [Masked Autoencoders Are Scalable Vision Learners](https://mlsanity.com/paper/2111.06377/) (2021)
- [Fourier Neural Operator for Parametric Partial Differential Equations](https://mlsanity.com/paper/2010.08895/) (2020)
- [Occupancy Networks: Learning 3D Reconstruction in Function Space](https://mlsanity.com/paper/1812.03828/) (2018)
- [DeepONet: Learning nonlinear operators for identifying differential equations based on the universal approximation theorem of operators](https://mlsanity.com/paper/1910.03193/) (2019)
- [Neural Operator: Graph Kernel Network for Partial Differential Equations](https://mlsanity.com/paper/2003.03485/) (2020)
- [3DShape2VecSet: A 3D Shape Representation for Neural Fields and Generative Diffusion Models](https://mlsanity.com/paper/2301.11445/) (2023)
- [Fourier Neural Operator with Learned Deformations for PDEs on General Geometries](https://mlsanity.com/paper/2207.05209/) (2022)
- [Choose a Transformer: Fourier or Galerkin](https://mlsanity.com/paper/2105.14995/) (2021)
- [ClimaX: A foundation model for weather and climate](https://mlsanity.com/paper/2301.10343/) (2023)
- [GNOT: A General Neural Operator Transformer for Operator Learning](https://mlsanity.com/paper/2302.14376/) (2023)
- [Transolver: A Fast Transformer Solver for PDEs on General Geometries](https://mlsanity.com/paper/2402.02366/) (2024)
- [Geometry-Informed Neural Operator for Large-Scale 3D PDEs](https://mlsanity.com/paper/2309.00583/) (2023)
- [Transformer for Partial Differential Equations' Operator Learning](https://mlsanity.com/paper/2205.13671/) (2022)
- [Factorized Fourier Neural Operators](https://mlsanity.com/paper/2111.13802/) (2021)
- [Adaptive Fourier Neural Operators: Efficient Token Mixers for Transformers](https://mlsanity.com/paper/2111.13587/) (2021)
- [ULIP-2: Towards Scalable Multimodal Pre-training for 3D Understanding](https://mlsanity.com/paper/2305.08275/) (2023)
- [DPOT: Auto-Regressive Denoising Operator Transformer for Large-Scale PDE Pre-Training](https://mlsanity.com/paper/2403.03542/) (2024)
- [AirfRANS: High Fidelity Computational Fluid Dynamics Dataset for Approximating Reynolds-Averaged Navier-Stokes Solutions](https://mlsanity.com/paper/2212.07564/) (2022)
- [Latent Neural Operator for Solving Forward and Inverse PDE Problems](https://mlsanity.com/paper/2406.03923/) (2024)
- [Pretraining Codomain Attention Neural Operators for Solving Multiphysics PDEs](https://mlsanity.com/paper/2403.12553/) (2024)
- [AROMA: Preserving Spatial Structure for Latent PDE Modeling with Local Neural Fields](https://mlsanity.com/paper/2406.02176/) (2024)
- [Data-Efficient Operator Learning via Unsupervised Pretraining and In-Context Learning](https://mlsanity.com/paper/2402.15734/) (2024)
- [Reference Neural Operators: Learning the Smooth Dependence of Solutions of PDEs on Geometric Deformations](https://mlsanity.com/paper/2405.17509/) (2024)
- [Finite Volume Features, Global Geometry Representations, and Residual Training for Deep Learning-based CFD Simulation](https://mlsanity.com/paper/2311.14464/) (2023)

## Built on by (most cited first, 1 of 1)

- [GeoPT: Scaling Physics Simulation via Lifted Geometric Pre-Training](https://mlsanity.com/paper/2602.20399/) (2026)

## Abstract (arXiv)

Industrial design evaluation often relies on high-fidelity simulations of governing partial differential equations (PDEs). While accurate, these simulations are computationally expensive, making dense exploration of design spaces impractical. Operator learning has emerged as a promising approach to accelerate PDE solution prediction; however, its effectiveness is often limited by the scarcity of labeled physics-based data. At the same time, large numbers of geometry-only candidate designs are readily available but remain largely untapped. We propose a two-stage framework to better exploit this abundant, physics-agnostic resource and improve supervised operator learning under limited labeled data. In Stage 1, we pretrain an autoencoder on a geometry reconstruction task to learn an expressive latent representation without PDE labels. In Stage 2, the neural operator is trained in a standard supervised manner to predict PDE solutions, using the pretrained latent embeddings as inputs instead of raw point clouds. Transformer-based architectures are adopted for both the autoencoder and the neural operator to handle point cloud data and integrate both stages seamlessly. Across four PDE datasets and three state-of-the-art transformer-based neural operators, our approach consistently improves prediction accuracy compared to models trained directly on raw point cloud inputs. These results demonstrate that representations from physics-agnostic pretraining provide a powerful foundation for data-efficient operator learning.