# Takedown: How It's Done in Modern Coding Agent Exploits

arXiv: https://arxiv.org/abs/2509.24240 · HTML: https://mlsanity.com/paper/2509.24240/

## Key facts

- Cited by 6 papers in the map (data through 14 Oct 2026).
- Placed in Agent threats, guardrails and governance, one of 16 directions in LLM agents and tool use.
- Builds on 37 of its 67 references that are in the map.
- First posted on arXiv 29 Sep 2025.

## Placed in

- LLM agents and tool use / [Agent threats, guardrails and governance](https://mlsanity.com/agents/agent-threats-guardrails-and-governance/)

## Builds on (most cited first, 30 of 37)

- [A Survey on Large Language Model based Autonomous Agents](https://mlsanity.com/paper/2308.11432/) (2023)
- [Not what you've signed up for: Compromising Real-World LLM-Integrated Applications with Indirect Prompt Injection](https://mlsanity.com/paper/2302.12173/) (2023)
- [Ignore Previous Prompt: Attack Techniques For Language Models](https://mlsanity.com/paper/2211.09527/) (2022)
- [Prompt Injection attack against LLM-integrated Applications](https://mlsanity.com/paper/2306.05499/) (2023)
- [InjecAgent: Benchmarking Indirect Prompt Injections in Tool-Integrated Large Language Model Agents](https://mlsanity.com/paper/2403.02691/) (2024)
- [SmoothLLM: Defending Large Language Models Against Jailbreaking Attacks](https://mlsanity.com/paper/2310.03684/) (2023)
- [StruQ: Defending Against Prompt Injection with Structured Queries](https://mlsanity.com/paper/2402.06363/) (2024)
- [PoisonedRAG: Knowledge Corruption Attacks to Retrieval-Augmented Generation of Large Language Models](https://mlsanity.com/paper/2402.07867/) (2024)
- [Model Context Protocol (MCP): Landscape, Security Threats, and Future Research Directions](https://mlsanity.com/paper/2503.23278/) (2025)
- [Benchmarking and Defending Against Indirect Prompt Injection Attacks on Large Language Models](https://mlsanity.com/paper/2312.14197/) (2023)
- [Do Users Write More Insecure Code with AI Assistants?](https://mlsanity.com/paper/2211.03622/) (2022)
- [AgentDojo: A Dynamic Environment to Evaluate Prompt Injection Attacks and Defenses for LLM Agents](https://mlsanity.com/paper/2406.13352/) (2024)
- [Memory Injection Attacks on LLM Agents via Query-Only Interaction](https://mlsanity.com/paper/2503.03704/) (2025)
- [The Emerged Security and Privacy of LLM Agent: A Survey with Case Studies](https://mlsanity.com/paper/2407.19354/) (2024)
- [AI Agents Under Threat: A Survey of Key Security Challenges and Future Pathways](https://mlsanity.com/paper/2406.02630/) (2024)
- [A Comprehensive Survey in LLM(-Agent) Full Stack Safety: Data, Training and Deployment](https://mlsanity.com/paper/2504.15585/) (2025)
- [PromptArmor: Simple yet Effective Prompt Injection Defenses](https://mlsanity.com/paper/2507.15219/) (2025)
- [A Survey on Trustworthy LLM Agents: Threats and Countermeasures](https://mlsanity.com/paper/2503.09648/) (2025)
- [LLM Hallucinations in Practical Code Generation: Phenomena, Mechanism, and Mitigation](https://mlsanity.com/paper/2409.20550/) (2024)
- [RedCode: Risky Code Execution and Generation Benchmark for Code Agents](https://mlsanity.com/paper/2411.07781/) (2024)
- [Breaking Agents: Compromising Autonomous LLM Agents Through Malfunction Amplification](https://mlsanity.com/paper/2407.20859/) (2024)
- [BadChain: Backdoor Chain-of-Thought Prompting for Large Language Models](https://mlsanity.com/paper/2401.12242/) (2024)
- [Imprompter: Tricking LLM Agents into Improper Tool Use](https://mlsanity.com/paper/2410.14923/) (2024)
- [SelfDefend: LLMs Can Defend Themselves against Jailbreaking in a Practical Manner](https://mlsanity.com/paper/2406.05498/) (2024)
- [A Survey of LLM-Driven AI Agent Communication: Protocols, Security Risks, and Defense Countermeasures](https://mlsanity.com/paper/2506.19676/) (2025)
- [Commercial LLM Agents Are Already Vulnerable to Simple Yet Dangerous Attacks](https://mlsanity.com/paper/2502.08586/) (2025)
- [InjecGuard: Benchmarking and Mitigating Over-defense in Prompt Injection Guardrail Models](https://mlsanity.com/paper/2410.22770/) (2024)
- [Enterprise-Grade Security for the Model Context Protocol (MCP): Frameworks and Mitigation Strategies](https://mlsanity.com/paper/2504.08623/) (2025)
- [Vibe Coding vs. Agentic Coding: Fundamentals and Practical Implications of Agentic AI](https://mlsanity.com/paper/2505.19443/) (2025)
- [Defensive Prompt Patch: A Robust and Interpretable Defense of LLMs against Jailbreak Attacks](https://mlsanity.com/paper/2405.20099/) (2024)

## Built on by (most cited first, 6 of 6)

- [SEVerA: Verified Synthesis of Self-Evolving Agents](https://mlsanity.com/paper/2603.25111/) (2026)
- [LeechHijack: Covert Computational Resource Exploitation in Intelligent Agent Systems](https://mlsanity.com/paper/2512.02321/) (2025)
- [Agent-Fence: Mapping Security Vulnerabilities Across Deep Research Agents](https://mlsanity.com/paper/2602.07652/) (2026)
- [One Goal, Many Commands: Characterizing Denylist Fragility in AI Agents](https://mlsanity.com/paper/2606.15549/) (2026)
- [Red-Teaming the Agentic Red-Team](https://mlsanity.com/paper/2606.24496/) (2026)
- [Beyond the Payload: How User Invocation Shapes Coding Agent Vulnerability to Repository Poisoning](https://mlsanity.com/paper/2608.30686/) (2026)

## Abstract (arXiv)

Coding agents, which are LLM-driven agents specialized in software development, have become increasingly prevalent in modern programming environments. Unlike traditional AI coding assistants, which offer simple code completion and suggestions, modern coding agents tackle more complex tasks with greater autonomy, such as generating entire programs from natural language instructions. To enable such capabilities, modern coding agents incorporate extensive functionalities, which in turn raise significant concerns over their security and privacy. Despite their growing adoption, systematic and in-depth security analysis of these agents has largely been overlooked. In this paper, we present a comprehensive security analysis of eight real-world coding agents. Our analysis addresses the limitations of prior approaches, which were often fragmented and ad hoc, by systematically examining the internal workflows of coding agents and identifying security threats across their components. Through the analysis, we identify 15 security issues, including previously overlooked or missed issues, that can be abused to compromise the confidentiality and integrity of user systems. Furthermore, we show that these security issues are not merely individual vulnerabilities, but can collectively lead to end-to-end exploitations. By leveraging these security issues, we successfully achieved arbitrary command execution in five agents and global data exfiltration in four agents, all without any user interaction or approval. Our findings highlight the need for a comprehensive security analysis in modern LLM-driven agents and demonstrate how insufficient security considerations can lead to severe vulnerabilities.
