# Bridging AI and Software Security: A Comparative Vulnerability Assessment of LLM Agent Deployment Paradigms

arXiv: https://arxiv.org/abs/2507.06323 · HTML: https://mlsanity.com/paper/2507.06323/

## Key facts

- Cited by 7 papers in the map (data through 14 Oct 2026).
- Placed in Agent threats, guardrails and governance, one of 16 directions in LLM agents and tool use.
- Builds on 40 of its 71 references that are in the map.
- First posted on arXiv 8 Jul 2025.

## Placed in

- LLM agents and tool use / [Agent threats, guardrails and governance](https://mlsanity.com/agents/agent-threats-guardrails-and-governance/)

## Builds on (most cited first, 30 of 40)

- [Chain-of-Thought Prompting Elicits Reasoning in Large Language Models](https://mlsanity.com/paper/2201.11903/) (2022)
- [ReAct: Synergizing Reasoning and Acting in Language Models](https://mlsanity.com/paper/2210.03629/) (2022)
- [Judging LLM-as-a-Judge with MT-Bench and Chatbot Arena](https://mlsanity.com/paper/2306.05685/) (2023)
- [Universal and Transferable Adversarial Attacks on Aligned Language Models](https://mlsanity.com/paper/2307.15043/) (2023)
- [G-Eval: NLG Evaluation using GPT-4 with Better Human Alignment](https://mlsanity.com/paper/2303.16634/) (2023)
- [A Survey on Large Language Model based Autonomous Agents](https://mlsanity.com/paper/2308.11432/) (2023)
- [Not what you've signed up for: Compromising Real-World LLM-Integrated Applications with Indirect Prompt Injection](https://mlsanity.com/paper/2302.12173/) (2023)
- [Jailbreaking Black Box Large Language Models in Twenty Queries](https://mlsanity.com/paper/2310.08419/) (2023)
- [Llama Guard: LLM-based Input-Output Safeguard for Human-AI Conversations](https://mlsanity.com/paper/2312.06674/) (2023)
- [Safe RLHF: Safe Reinforcement Learning from Human Feedback](https://mlsanity.com/paper/2310.12773/) (2023)
- [InjecAgent: Benchmarking Indirect Prompt Injections in Tool-Integrated Large Language Model Agents](https://mlsanity.com/paper/2403.02691/) (2024)
- [A Survey on Large Language Model (LLM) Security and Privacy: The Good, the Bad, and the Ugly](https://mlsanity.com/paper/2312.02003/) (2023)
- [Formalizing and Benchmarking Prompt Injection Attacks and Defenses](https://mlsanity.com/paper/2310.12815/) (2023)
- [PoisonedRAG: Knowledge Corruption Attacks to Retrieval-Augmented Generation of Large Language Models](https://mlsanity.com/paper/2402.07867/) (2024)
- [Model Context Protocol (MCP): Landscape, Security Threats, and Future Research Directions](https://mlsanity.com/paper/2503.23278/) (2025)
- [Inverse Scaling: When Bigger Isn't Better](https://mlsanity.com/paper/2306.09479/) (2023)
- [An LLM Compiler for Parallel Function Calling](https://mlsanity.com/paper/2312.04511/) (2023)
- [IsolateGPT: An Execution Isolation Architecture for LLM-Based Agentic Systems](https://mlsanity.com/paper/2403.04960/) (2024)
- [AI Agents Under Threat: A Survey of Key Security Challenges and Future Pathways](https://mlsanity.com/paper/2406.02630/) (2024)
- [Automatic and Universal Prompt Injection Attacks against Large Language Models](https://mlsanity.com/paper/2403.04957/) (2024)
- [A survey of agent interoperability protocols: Model Context Protocol (MCP), Agent Communication Protocol (ACP), Agent-to-Agent Protocol (A2A), and Agent Network Protocol (ANP)](https://mlsanity.com/paper/2505.02279/) (2025)
- [Breaking Agents: Compromising Autonomous LLM Agents Through Malfunction Amplification](https://mlsanity.com/paper/2407.20859/) (2024)
- [Design Patterns for Securing LLM Agents against Prompt Injections](https://mlsanity.com/paper/2506.08837/) (2025)
- [Open Challenges in Multi-Agent Security: Towards Secure Systems of Interacting AI Agents](https://mlsanity.com/paper/2505.02077/) (2025)
- [TRiSM for Agentic AI: A Review of Trust, Risk, and Security Management in LLM-based Agentic Multi-Agent Systems](https://mlsanity.com/paper/2506.04133/) (2025)
- [TinyAgent: Function Calling at the Edge](https://mlsanity.com/paper/2409.00608/) (2024)
- [Identifying and Mitigating Vulnerabilities in LLM-Integrated Applications](https://mlsanity.com/paper/2311.16153/) (2023)
- [Large Language Model for Vulnerability Detection: Emerging Results and Future Directions](https://mlsanity.com/paper/2401.15468/) (2024)
- [REAL: Benchmarking Autonomous Agents on Deterministic Simulations of Real Websites](https://mlsanity.com/paper/2504.11543/) (2025)
- [A Comprehensive Overview of Backdoor Attacks in Large Language Models within Communication Networks](https://mlsanity.com/paper/2308.14367/) (2023)

## Built on by (most cited first, 7 of 7)

- [MCP Security Bench (MSB): Benchmarking Attacks Against Model Context Protocol in LLM Agents](https://mlsanity.com/paper/2510.15994/) (2025)
- [Toward Secure LLM Agents: Threat Surfaces, Attacks, Defenses, and Evaluation](https://mlsanity.com/paper/2606.10749/) (2026)
- [Penetration Testing of Agentic AI: A Comparative Security Analysis Across Models and Frameworks](https://mlsanity.com/paper/2512.14860/) (2025)
- [MCP-DPT: A Defense-Placement Taxonomy and Coverage Analysis for Model Context Protocol Security](https://mlsanity.com/paper/2604.07551/) (2026)
- [Large Language Models for Agentic NetOps and AIOps: Architectures, Evaluation, and Safety](https://mlsanity.com/paper/2605.12729/) (2026)
- [When the Manual Lies: A Realistic Benchmark to Evaluate MCP Poisoning Attacks for LLM Agents](https://mlsanity.com/paper/2605.24069/) (2026)
- [Connecting the Dots in Agentic AI Security: A Cross-Dimensional Threat Taxonomy, Evaluation Maturity, and Open Challenges](https://mlsanity.com/paper/2609.23894/) (2026)

## Abstract (arXiv)

Large Language Model (LLM) agents face security vulnerabilities spanning AI-specific and traditional software domains, yet current research addresses these separately. This study bridges this gap through comparative evaluation of Function Calling architecture and Model Context Protocol (MCP) deployment paradigms using a unified threat classification framework. We tested 3,250 attack scenarios across seven language models, evaluating simple, composed, and chained attacks targeting both AI-specific threats (prompt injection) and software vulnerabilities (JSON injection, denial-of-service). Function Calling showed higher overall attack success rates (73.5% vs 62.59% for MCP), with greater system-centric vulnerability while MCP exhibited increased LLM-centric exposure. Attack complexity dramatically amplified effectiveness, with chained attacks achieving 91-96% success rates. Counterintuitively, advanced reasoning models demonstrated higher exploitability despite better threat detection. Results demonstrate that architectural choices fundamentally reshape threat landscapes. This work establishes methodological foundations for cross-domain LLM agent security assessment and provides evidence-based guidance for secure deployment. Code and experimental materials are available at https: // github. com/ theconsciouslab-ai/llm-agent-security.