# Learning Mappings in Mesh-based Simulations

arXiv: https://arxiv.org/abs/2506.12652 · HTML: https://mlsanity.com/paper/2506.12652/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 36 of its 56 references that are in the map.
- First posted on arXiv 14 Jun 2025.

## Builds on (most cited first, 30 of 36)

- [Attention Is All You Need](https://mlsanity.com/paper/1706.03762/) (2017)
- [U-Net: Convolutional Networks for Biomedical Image Segmentation](https://mlsanity.com/paper/1505.04597/) (2015)
- [Inductive Representation Learning on Large Graphs](https://mlsanity.com/paper/1706.02216/) (2017)
- [PointNet: Deep Learning on Point Sets for 3D Classification and Segmentation](https://mlsanity.com/paper/1612.00593/) (2016)
- [PointNet++: Deep Hierarchical Feature Learning on Point Sets in a Metric Space](https://mlsanity.com/paper/1706.02413/) (2017)
- [Fourier Neural Operator for Parametric Partial Differential Equations](https://mlsanity.com/paper/2010.08895/) (2020)
- [Real-Time Single Image and Video Super-Resolution Using an Efficient Sub-Pixel Convolutional Neural Network](https://mlsanity.com/paper/1609.05158/) (2016)
- [Learning Mesh-Based Simulation with Graph Networks](https://mlsanity.com/paper/2010.03409/) (2020)
- [Fourier Neural Operator with Learned Deformations for PDEs on General Geometries](https://mlsanity.com/paper/2207.05209/) (2022)
- [GNOT: A General Neural Operator Transformer for Operator Learning](https://mlsanity.com/paper/2302.14376/) (2023)
- [Transformer for Partial Differential Equations' Operator Learning](https://mlsanity.com/paper/2205.13671/) (2022)
- [PhyGeoNet: Physics-Informed Geometry-Adaptive Convolutional Neural Networks for Solving Parameterized Steady-State PDEs on Irregular Domain](https://mlsanity.com/paper/2004.13145/) (2020)
- [Deep Parametric Continuous Convolutional Neural Networks](https://mlsanity.com/paper/2101.06742/) (2021)
- [The Well: a Large-Scale Collection of Diverse Physics Simulations for Machine Learning](https://mlsanity.com/paper/2412.00568/) (2024)
- [PINNsFormer: A Transformer-Based Framework For Physics-Informed Neural Networks](https://mlsanity.com/paper/2307.11833/) (2023)
- [Global field reconstruction from sparse sensors with Voronoi tessellation-assisted deep learning](https://mlsanity.com/paper/2101.00554/) (2021)
- [Geom-DeepONet: A Point-cloud-based Deep Operator Network for Field Predictions on 3D Parameterized Geometries](https://mlsanity.com/paper/2403.14788/) (2024)
- [A Point-Cloud Deep Learning Framework for Prediction of Fluid Flow Fields on Irregular Geometries](https://mlsanity.com/paper/2010.09469/) (2020)
- [Mitigating Spectral Bias in Neural Operators via High-Frequency Scaling for Physical Systems](https://mlsanity.com/paper/2503.13695/) (2025)
- [Understanding GNN Computational Graph: A Coordinated Computation, IO, and Memory Perspective](https://mlsanity.com/paper/2110.09524/) (2021)
- [Text2PDE: Latent Diffusion Models for Accessible Physics Simulation](https://mlsanity.com/paper/2410.01153/) (2024)
- [Beyond Regular Grids: Fourier-Based Neural Operators on Arbitrary Domains](https://mlsanity.com/paper/2305.19663/) (2023)
- [Factorized Implicit Global Convolution for Automotive Computational Fluid Dynamics Prediction](https://mlsanity.com/paper/2502.04317/) (2025)
- [Deep Learning for Real-Time Aerodynamic Evaluations of Arbitrary Vehicle Shapes](https://mlsanity.com/paper/2108.05798/) (2021)
- [Real-time Inference and Extrapolation via a Diffusion-inspired Temporal Transformer Operator (DiTTO)](https://mlsanity.com/paper/2307.09072/) (2023)
- [MMGP: a Mesh Morphing Gaussian Process-based machine learning method for regression of physical problems under non-parameterized geometrical variability](https://mlsanity.com/paper/2305.12871/) (2023)
- [Efficient deep data assimilation with sparse observations and time-varying sensors](https://mlsanity.com/paper/2310.16187/) (2023)
- [Machine learning for modelling unstructured grid data in computational physics: a review](https://mlsanity.com/paper/2502.09346/) (2025)
- [Parametric Encoding with Attention and Convolution Mitigate Spectral Bias of Neural Partial Differential Equation Solvers](https://mlsanity.com/paper/2403.15652/) (2024)
- [Applying Convolutional Neural Networks to Data on Unstructured Meshes with Space-Filling Curves](https://mlsanity.com/paper/2011.14820/) (2020)

## Abstract (arXiv)

Many real-world physics and engineering problems arise in geometrically complex domains discretized by meshes for numerical simulations. The nodes of these potentially irregular meshes naturally form point clouds whose limited tractability poses significant challenges for learning mappings via machine learning models. To address this, we introduce a novel and parameter-free encoding scheme that aggregates footprints of points onto grid vertices and yields information-rich grid representations of the topology. Such structured representations are well-suited for standard convolution and FFT (Fast Fourier Transform) operations and enable efficient learning of mappings between encoded input-output pairs using Convolutional Neural Networks (CNNs). Specifically, we integrate our encoder with a uniquely designed UNet (E-UNet) and benchmark its performance against Fourier- and transformer-based models across diverse 2D and 3D problems where we analyze the performance in terms of predictive accuracy, data efficiency, and noise robustness. Furthermore, we highlight the versatility of our encoding scheme in various mapping tasks including recovering full point cloud responses from partial observations. Our proposed framework offers a practical alternative to both primitive and computationally intensive encoding schemes; supporting broad adoption in computational science applications involving mesh-based simulations.