# A Multimodal Pipeline for Clinical Data Extraction: Applying Vision-Language Models to Scans of Transfusion Reaction Reports

arXiv: https://arxiv.org/abs/2504.20220 · HTML: https://mlsanity.com/paper/2504.20220/

## Key facts

- Cited by 1 papers in the map (data through 14 Oct 2026).
- Placed in Medical vision-language models, one of 16 directions in Multimodal LLMs / vision-language models.
- Builds on 14 of its 33 references that are in the map.
- First posted on arXiv 28 Apr 2025.

## Placed in

- Multimodal LLMs / vision-language models / [Medical vision-language models](https://mlsanity.com/mllm/medical-vision-language-models/)

## Builds on (most cited first, 14 of 14)

- [Attention Is All You Need](https://mlsanity.com/paper/1706.03762/) (2017)
- [Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks](https://mlsanity.com/paper/1506.01497/) (2015)
- [End-to-End Object Detection with Transformers](https://mlsanity.com/paper/2005.12872/) (2020)
- [You Only Look Once: Unified, Real-Time Object Detection](https://mlsanity.com/paper/1506.02640/) (2015)
- [VQA: Visual Question Answering](https://mlsanity.com/paper/1505.00468/) (2015)
- [PaLM-E: An Embodied Multimodal Language Model](https://mlsanity.com/paper/2303.03378/) (2023)
- [Vision-Language Models for Vision Tasks: A Survey](https://mlsanity.com/paper/2304.00685/) (2023)
- [LayoutLM: Pre-training of Text and Layout for Document Image Understanding](https://mlsanity.com/paper/1912.13318/) (2019)
- [LayoutLMv2: Multi-modal Pre-training for Visually-Rich Document Understanding](https://mlsanity.com/paper/2012.14740/) (2020)
- [OCR-free Document Understanding Transformer](https://mlsanity.com/paper/2111.15664/) (2021)
- [FUNSD: A Dataset for Form Understanding in Noisy Scanned Documents](https://mlsanity.com/paper/1905.13538/) (2019)
- [Evaluation of Deep Convolutional Nets for Document Image Classification and Retrieval](https://mlsanity.com/paper/1502.07058/) (2015)
- [Pixtral 12B](https://mlsanity.com/paper/2410.07073/) (2024)
- [PP-OCRv2: Bag of Tricks for Ultra Lightweight OCR System](https://mlsanity.com/paper/2109.03144/) (2021)

## Built on by (most cited first, 1 of 1)

- [From Chaos to Clarity: Schema-Constrained AI for Auditable Biomedical Evidence Extraction from Full-Text PDFs](https://mlsanity.com/paper/2601.14267/) (2025)

## Abstract (arXiv)

Despite the growing adoption of electronic health records, many processes still rely on paper documents, reflecting the heterogeneous real-world conditions in which healthcare is delivered. The manual transcription process is time-consuming and prone to errors when transferring paper-based data to digital formats. To streamline this workflow, this study presents an open-source pipeline that extracts and categorizes checkbox data from scanned documents. Demonstrated on transfusion reaction reports, the design supports adaptation to other checkbox-rich document types. The proposed method integrates checkbox detection, multilingual optical character recognition (OCR) and multilingual vision-language models (VLMs). The pipeline achieves high precision and recall compared against annually compiled gold-standards from 2017 to 2024. The result is a reduction in administrative workload and accurate regulatory reporting. The open-source availability of this pipeline encourages self-hosted parsing of checkbox forms.