# PathSeqSAM: Sequential Modeling for Pathology Image Segmentation with SAM2

arXiv: https://arxiv.org/abs/2504.10526 · HTML: https://mlsanity.com/paper/2504.10526/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 7 of its 11 references that are in the map.
- First posted on arXiv 12 Apr 2025.

## Builds on (most cited first, 7 of 7)

- [LoRA: Low-Rank Adaptation of Large Language Models](https://mlsanity.com/paper/2106.09685/) (2021)
- [Segment Anything](https://mlsanity.com/paper/2304.02643/) (2023)
- [SAM 2: Segment Anything in Images and Videos](https://mlsanity.com/paper/2408.00714/) (2024)
- [Medical SAM Adapter: Adapting Segment Anything Model for Medical Image Segmentation](https://mlsanity.com/paper/2304.12620/) (2023)
- [Promise:Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models](https://mlsanity.com/paper/2310.19721/) (2023)
- [Omni-Seg: A Scale-aware Dynamic Network for Renal Pathological Image Segmentation](https://mlsanity.com/paper/2206.13632/) (2022)
- [KPIs 2024 Challenge: Advancing Glomerular Segmentation from Patch- to Slide-Level](https://mlsanity.com/paper/2502.07288/) (2025)

## Abstract (arXiv)

Current methods for pathology image segmentation typically treat 2D slices independently, ignoring valuable cross-slice information. We present PathSeqSAM, a novel approach that treats 2D pathology slices as sequential video frames using SAM2's memory mechanisms. Our method introduces a distance-aware attention mechanism that accounts for variable physical distances between slices and employs LoRA for domain adaptation. Evaluated on the KPI Challenge 2024 dataset for glomeruli segmentation, PathSeqSAM demonstrates improved segmentation quality, particularly in challenging cases that benefit from cross-slice context. We have publicly released our code at https://github.com/JackyyyWang/PathSeqSAM.