# Toward Deep Learning-based Segmentation and Quantitative Analysis of Cervical Spinal Cord Magnetic Resonance Images

arXiv: https://arxiv.org/abs/2409.19354 · HTML: https://mlsanity.com/paper/2409.19354/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 17 of its 27 references that are in the map.
- First posted on arXiv 28 Sep 2024.

## Builds on (most cited first, 17 of 17)

- [An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale](https://mlsanity.com/paper/2010.11929/) (2020)
- [U-Net: Convolutional Networks for Biomedical Image Segmentation](https://mlsanity.com/paper/1505.04597/) (2015)
- [Swin Transformer: Hierarchical Vision Transformer using Shifted Windows](https://mlsanity.com/paper/2103.14030/) (2021)
- [Mask R-CNN](https://mlsanity.com/paper/1703.06870/) (2017)
- [DeepLab: Semantic Image Segmentation with Deep Convolutional Nets, Atrous Convolution, and Fully Connected CRFs](https://mlsanity.com/paper/1606.00915/) (2016)
- [Pyramid Scene Parsing Network](https://mlsanity.com/paper/1612.01105/) (2016)
- [Pyramid Vision Transformer: A Versatile Backbone for Dense Prediction without Convolutions](https://mlsanity.com/paper/2102.12122/) (2021)
- [TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation](https://mlsanity.com/paper/2102.04306/) (2021)
- [SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation](https://mlsanity.com/paper/1511.00561/) (2015)
- [UNETR: Transformers for 3D Medical Image Segmentation](https://mlsanity.com/paper/2103.10504/) (2021)
- [XCiT: Cross-Covariance Image Transformers](https://mlsanity.com/paper/2106.09681/) (2021)
- [TransFuse: Fusing Transformers and CNNs for Medical Image Segmentation](https://mlsanity.com/paper/2102.08005/) (2021)
- [CoTr: Efficiently Bridging CNN and Transformer for 3D Medical Image Segmentation](https://mlsanity.com/paper/2103.03024/) (2021)
- [UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with Transformer](https://mlsanity.com/paper/2109.04335/) (2021)
- [MultiResUNet : Rethinking the U-Net Architecture for Multimodal Biomedical Image Segmentation](https://mlsanity.com/paper/1902.04049/) (2019)
- [Mixed Transformer U-Net For Medical Image Segmentation](https://mlsanity.com/paper/2111.04734/) (2021)
- [U-Net Transformer: Self and Cross Attention for Medical Image Segmentation](https://mlsanity.com/paper/2103.06104/) (2021)

## Abstract (arXiv)

This research proposal discusses two challenges in the field of medical image analysis: the multi-parametric investigation on microstructural and macrostructural characteristics of the cervical spinal cord and deep learning-based medical image segmentation. First, we conduct a thorough analysis of the cervical spinal cord within a healthy population. Unlike most previous studies, which required medical professionals to perform functional examinations using metrics like the modified Japanese Orthopaedic Association (mJOA) score or the American Spinal Injury Association (ASIA) impairment scale, this research focuses solely on Magnetic Resonance (MR) images of the cervical spinal cord. Second, we employ cutting-edge deep learning-based segmentation methods to achieve highly accurate macrostructural measurements from MR images. To this end, we propose an enhanced UNet-like Transformer-based framework with attentive skip connections. This paper reports on the problem domain, proposed solutions, current status of research, and expected contributions.