# Rethinking Independent Cross-Entropy Loss For Graph-Structured Data

arXiv: https://arxiv.org/abs/2405.15564 · HTML: https://mlsanity.com/paper/2405.15564/

## Key facts

- Cited by 5 papers in the map (data through 14 Oct 2026).
- Builds on 46 of its 68 references that are in the map.
- First posted on arXiv 24 May 2024.

## Builds on (most cited first, 30 of 46)

- [Semi-Supervised Classification with Graph Convolutional Networks](https://mlsanity.com/paper/1609.02907/) (2016)
- [Graph Attention Networks](https://mlsanity.com/paper/1710.10903/) (2017)
- [Inductive Representation Learning on Large Graphs](https://mlsanity.com/paper/1706.02216/) (2017)
- [Intriguing properties of neural networks](https://mlsanity.com/paper/1312.6199/) (2013)
- [On Calibration of Modern Neural Networks](https://mlsanity.com/paper/1706.04599/) (2017)
- [How Powerful are Graph Neural Networks?](https://mlsanity.com/paper/1810.00826/) (2018)
- [Open Graph Benchmark: Datasets for Machine Learning on Graphs](https://mlsanity.com/paper/2005.00687/) (2020)
- [Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering](https://mlsanity.com/paper/1606.09375/) (2016)
- [node2vec: Scalable Feature Learning for Networks](https://mlsanity.com/paper/1607.00653/) (2016)
- [DeepWalk: Online Learning of Social Representations](https://mlsanity.com/paper/1403.6652/) (2014)
- [Simplifying Graph Convolutional Networks](https://mlsanity.com/paper/1902.07153/) (2019)
- [LightGCN: Simplifying and Powering Graph Convolution Network for Recommendation](https://mlsanity.com/paper/2002.02126/) (2020)
- [Predict then Propagate: Graph Neural Networks meet Personalized PageRank](https://mlsanity.com/paper/1810.05997/) (2018)
- [Simple and Deep Graph Convolutional Networks](https://mlsanity.com/paper/2007.02133/) (2020)
- [Geom-GCN: Geometric Graph Convolutional Networks](https://mlsanity.com/paper/2002.05287/) (2020)
- [Graph Neural Networks for Social Recommendation](https://mlsanity.com/paper/1902.07243/) (2019)
- [GraphSAINT: Graph Sampling Based Inductive Learning Method](https://mlsanity.com/paper/1907.04931/) (2019)
- [Multi-scale Attributed Node Embedding](https://mlsanity.com/paper/1909.13021/) (2019)
- [Cluster-GCN: An Efficient Algorithm for Training Deep and Large Graph Convolutional Networks](https://mlsanity.com/paper/1905.07953/) (2019)
- [Masked Label Prediction: Unified Message Passing Model for Semi-Supervised Classification](https://mlsanity.com/paper/2009.03509/) (2020)
- [MetaICL: Learning to Learn In Context](https://mlsanity.com/paper/2110.15943/) (2021)
- [Self-Attention Graph Pooling](https://mlsanity.com/paper/1904.08082/) (2019)
- [Graph Structure Learning for Robust Graph Neural Networks](https://mlsanity.com/paper/2005.10203/) (2020)
- [Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking](https://mlsanity.com/paper/1707.03815/) (2017)
- [SIGN: Scalable Inception Graph Neural Networks](https://mlsanity.com/paper/2004.11198/) (2020)
- [Combining Label Propagation and Simple Models Out-performs Graph Neural Networks](https://mlsanity.com/paper/2010.13993/) (2020)
- [Topology Attack and Defense for Graph Neural Networks: An Optimization Perspective](https://mlsanity.com/paper/1906.04214/) (2019)
- [Structural Deep Clustering Network](https://mlsanity.com/paper/2002.01633/) (2020)
- [Characteristic Functions on Graphs: Birds of a Feather, from Statistical Descriptors to Parametric Models](https://mlsanity.com/paper/2005.07959/) (2020)
- [Towards Deeper Graph Neural Networks with Differentiable Group Normalization](https://mlsanity.com/paper/2006.06972/) (2020)

## Built on by (most cited first, 5 of 5)

- [Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A Benchmark](https://mlsanity.com/paper/2406.15523/) (2024)
- [Homophily Enhanced Graph Domain Adaptation](https://mlsanity.com/paper/2505.20089/) (2025)
- [Mamba-Based Graph Convolutional Networks: Tackling Over-smoothing with Selective State Space](https://mlsanity.com/paper/2501.15461/) (2025)
- [Automatic Self-supervised Learning for Social Recommendations](https://mlsanity.com/paper/2412.18735/) (2024)
- [Node-level Graph Neural Architecture Search Framework](https://mlsanity.com/paper/2610.09297/) (2026)

## Abstract (arXiv)

Graph neural networks (GNNs) have exhibited prominent performance in learning graph-structured data. Considering node classification task, based on the i.i.d assumption among node labels, the traditional supervised learning simply sums up cross-entropy losses of the independent training nodes and applies the average loss to optimize GNNs' weights. But different from other data formats, the nodes are naturally connected. It is found that the independent distribution modeling of node labels restricts GNNs' capability to generalize over the entire graph and defend adversarial attacks. In this work, we propose a new framework, termed joint-cluster supervised learning, to model the joint distribution of each node with its corresponding cluster. We learn the joint distribution of node and cluster labels conditioned on their representations, and train GNNs with the obtained joint loss. In this way, the data-label reference signals extracted from the local cluster explicitly strengthen the discrimination ability on the target node. The extensive experiments demonstrate that our joint-cluster supervised learning can effectively bolster GNNs' node classification accuracy. Furthermore, being benefited from the reference signals which may be free from spiteful interference, our learning paradigm significantly protects the node classification from being affected by the adversarial attack.