# OpenMEDLab: An Open-source Platform for Multi-modality Foundation Models in Medicine

arXiv: https://arxiv.org/abs/2402.18028 · HTML: https://mlsanity.com/paper/2402.18028/

## Key facts

- Cited by 5 papers in the map (data through 14 Oct 2026).
- Builds on 31 of its 50 references that are in the map.
- First posted on arXiv 28 Feb 2024.

## Builds on (most cited first, 30 of 31)

- [Learning Transferable Visual Models From Natural Language Supervision](https://mlsanity.com/paper/2103.00020/) (2021)
- [Language Models are Few-Shot Learners](https://mlsanity.com/paper/2005.14165/) (2020)
- [An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale](https://mlsanity.com/paper/2010.11929/) (2020)
- [Segment Anything](https://mlsanity.com/paper/2304.02643/) (2023)
- [Scaling Laws for Neural Language Models](https://mlsanity.com/paper/2001.08361/) (2020)
- [Training a Helpful and Harmless Assistant with Reinforcement Learning from Human Feedback](https://mlsanity.com/paper/2204.05862/) (2022)
- [QLoRA: Efficient Finetuning of Quantized LLMs](https://mlsanity.com/paper/2305.14314/) (2023)
- [FlashAttention-2: Faster Attention with Better Parallelism and Work Partitioning](https://mlsanity.com/paper/2307.08691/) (2023)
- [GPTQ: Accurate Post-Training Quantization for Generative Pre-trained Transformers](https://mlsanity.com/paper/2210.17323/) (2022)
- [AWQ: Activation-aware Weight Quantization for LLM Compression and Acceleration](https://mlsanity.com/paper/2306.00978/) (2023)
- [BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining](https://mlsanity.com/paper/2210.10341/) (2022)
- [Rethinking Few-Shot Image Classification: a Good Embedding Is All You Need?](https://mlsanity.com/paper/2003.11539/) (2020)
- [A Baseline for Few-Shot Image Classification](https://mlsanity.com/paper/1909.02729/) (2019)
- [On the Challenges and Perspectives of Foundation Models for Medical Image Analysis](https://mlsanity.com/paper/2306.05705/) (2023)
- [STU-Net: Scalable and Transferable Medical Image Segmentation Models Empowered by Large-Scale Supervised Pre-training](https://mlsanity.com/paper/2304.06716/) (2023)
- [Foundation Model for Endoscopy Video Analysis via Large-scale Self-supervised Pre-train](https://mlsanity.com/paper/2306.16741/) (2023)
- [USFM: A Universal Ultrasound Foundation Model Generalized to Tasks and Organs towards Label Efficient Image Analysis](https://mlsanity.com/paper/2401.00153/) (2023)
- [Medical Image Understanding with Pretrained Vision Language Models: A Comprehensive Study](https://mlsanity.com/paper/2209.15517/) (2022)
- [BianQue: Balancing the Questioning and Suggestion Ability of Health LLMs with Multi-turn Health Conversations Polished by ChatGPT](https://mlsanity.com/paper/2310.15896/) (2023)
- [SA-Med2D-20M Dataset: Segment Anything in 2D Medical Imaging with 20 Million masks](https://mlsanity.com/paper/2311.11969/) (2023)
- [Few-shot Medical Image Segmentation using a Global Correlation Network with Discriminative Embedding](https://mlsanity.com/paper/2012.05440/) (2020)
- [Text-guided Foundation Model Adaptation for Pathological Image Classification](https://mlsanity.com/paper/2307.14901/) (2023)
- [MedFMC: A Real-world Dataset and Benchmark For Foundation Model Adaptation in Medical Image Classification](https://mlsanity.com/paper/2306.09579/) (2023)
- [SegRap2023: A Benchmark of Organs-at-Risk and Gross Tumor Volume Segmentation for Radiotherapy Planning of Nasopharyngeal Carcinoma](https://mlsanity.com/paper/2312.09576/) (2023)
- [Data-Centric Foundation Models in Computational Healthcare: A Survey](https://mlsanity.com/paper/2401.02458/) (2024)
- [MIS-FM: 3D Medical Image Segmentation using Foundation Models Pretrained on a Large-Scale Unannotated Dataset](https://mlsanity.com/paper/2306.16925/) (2023)
- [FHIST: A Benchmark for Few-shot Classification of Histological Images](https://mlsanity.com/paper/2206.00092/) (2022)
- [PathoDuet: Foundation Models for Pathological Slide Analysis of H&E and IHC Stains](https://mlsanity.com/paper/2312.09894/) (2023)
- [SenseCare: A Research Platform for Medical Image Informatics and Interactive 3D Visualization](https://mlsanity.com/paper/2004.07031/) (2020)
- [Deblurring Masked Autoencoder is Better Recipe for Ultrasound Image Recognition](https://mlsanity.com/paper/2306.08249/) (2023)

## Built on by (most cited first, 5 of 5)

- [A Comprehensive Survey of Foundation Models in Medicine](https://mlsanity.com/paper/2406.10729/) (2024)
- [How to Enable LLM with 3D Capacity? A Survey of Spatial Reasoning in LLM](https://mlsanity.com/paper/2504.05786/) (2025)
- [MedBench: A Comprehensive, Standardized, and Reliable Benchmarking System for Evaluating Chinese Medical Large Language Models](https://mlsanity.com/paper/2407.10990/) (2024)
- [Scaling Physical Reasoning with the PHYSICS Dataset](https://mlsanity.com/paper/2506.00022/) (2025)
- [Opportunities and challenges in the application of large artificial intelligence models in radiology](https://mlsanity.com/paper/2403.16112/) (2024)

## Abstract (arXiv)

The emerging trend of advancing generalist artificial intelligence, such as GPTv4 and Gemini, has reshaped the landscape of research (academia and industry) in machine learning and many other research areas. However, domain-specific applications of such foundation models (e.g., in medicine) remain untouched or often at their very early stages. It will require an individual set of transfer learning and model adaptation techniques by further expanding and injecting these models with domain knowledge and data. The development of such technologies could be largely accelerated if the bundle of data, algorithms, and pre-trained foundation models were gathered together and open-sourced in an organized manner. In this work, we present OpenMEDLab, an open-source platform for multi-modality foundation models. It encapsulates not only solutions of pioneering attempts in prompting and fine-tuning large language and vision models for frontline clinical and bioinformatic applications but also building domain-specific foundation models with large-scale multi-modal medical data. Importantly, it opens access to a group of pre-trained foundation models for various medical image modalities, clinical text, protein engineering, etc. Inspiring and competitive results are also demonstrated for each collected approach and model in a variety of benchmarks for downstream tasks. We welcome researchers in the field of medical artificial intelligence to continuously contribute cutting-edge methods and models to OpenMEDLab, which can be accessed via https://github.com/openmedlab.
