# A Joint-Reasoning based Disease Q&A System

arXiv: https://arxiv.org/abs/2401.03181 · HTML: https://mlsanity.com/paper/2401.03181/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 35 of its 80 references that are in the map.
- First posted on arXiv 6 Jan 2024.

## Builds on (most cited first, 30 of 35)

- [BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding](https://mlsanity.com/paper/1810.04805/) (2018)
- [Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformer](https://mlsanity.com/paper/1910.10683/) (2019)
- [RoBERTa: A Robustly Optimized BERT Pretraining Approach](https://mlsanity.com/paper/1907.11692/) (2019)
- [Retrieval-Augmented Generation for Knowledge-Intensive NLP Tasks](https://mlsanity.com/paper/2005.11401/) (2020)
- [Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks](https://mlsanity.com/paper/1908.10084/) (2019)
- [BART: Denoising Sequence-to-Sequence Pre-training for Natural Language Generation, Translation, and Comprehension](https://mlsanity.com/paper/1910.13461/) (2019)
- [BERTScore: Evaluating Text Generation with BERT](https://mlsanity.com/paper/1904.09675/) (2019)
- [SQuAD: 100,000+ Questions for Machine Comprehension of Text](https://mlsanity.com/paper/1606.05250/) (2016)
- [REALM: Retrieval-Augmented Language Model Pre-Training](https://mlsanity.com/paper/2002.08909/) (2020)
- [Language Models as Knowledge Bases?](https://mlsanity.com/paper/1909.01066/) (2019)
- [Don't Stop Pretraining: Adapt Language Models to Domains and Tasks](https://mlsanity.com/paper/2004.10964/) (2020)
- [BEIR: A Heterogenous Benchmark for Zero-shot Evaluation of Information Retrieval Models](https://mlsanity.com/paper/2104.08663/) (2021)
- [SemEval-2017 Task 1: Semantic Textual Similarity - Multilingual and Cross-lingual Focused Evaluation](https://mlsanity.com/paper/1708.00055/) (2017)
- [MPNet: Masked and Permuted Pre-training for Language Understanding](https://mlsanity.com/paper/2004.09297/) (2020)
- [Reading Wikipedia to Answer Open-Domain Questions](https://mlsanity.com/paper/1704.00051/) (2017)
- [Convolutional 2D Knowledge Graph Embeddings](https://mlsanity.com/paper/1707.01476/) (2017)
- [A Survey on Knowledge Graphs: Representation, Acquisition and Applications](https://mlsanity.com/paper/2002.00388/) (2020)
- [ELI5: Long Form Question Answering](https://mlsanity.com/paper/1907.09190/) (2019)
- [QA-GNN: Reasoning with Language Models and Knowledge Graphs for Question Answering](https://mlsanity.com/paper/2104.06378/) (2021)
- [Efficient Natural Language Response Suggestion for Smart Reply](https://mlsanity.com/paper/1705.00652/) (2017)
- [Retrieving and Reading: A Comprehensive Survey on Open-domain Question Answering](https://mlsanity.com/paper/2101.00774/) (2021)
- [Hurdles to Progress in Long-form Question Answering](https://mlsanity.com/paper/2103.06332/) (2021)
- [A Question-Entailment Approach to Question Answering](https://mlsanity.com/paper/1901.08079/) (2019)
- [TSDAE: Using Transformer-based Sequential Denoising Auto-Encoder for Unsupervised Sentence Embedding Learning](https://mlsanity.com/paper/2104.06979/) (2021)
- [Subgraph Retrieval Enhanced Model for Multi-hop Knowledge Base Question Answering](https://mlsanity.com/paper/2202.13296/) (2022)
- [Compositional Temporal Grounding with Structured Variational Cross-Graph Correspondence Learning](https://mlsanity.com/paper/2203.13049/) (2022)
- [Semantic Answer Similarity for Evaluating Question Answering Models](https://mlsanity.com/paper/2108.06130/) (2021)
- [JointLK: Joint Reasoning with Language Models and Knowledge Graphs for Commonsense Question Answering](https://mlsanity.com/paper/2112.02732/) (2021)
- [Response Ranking with Deep Matching Networks and External Knowledge in Information-seeking Conversation Systems](https://mlsanity.com/paper/1805.00188/) (2018)
- [Incorporating External Knowledge into Machine Reading for Generative Question Answering](https://mlsanity.com/paper/1909.02745/) (2019)

## Abstract (arXiv)

Medical question answer (QA) assistants respond to lay users' health-related queries by synthesizing information from multiple sources using natural language processing and related techniques. They can serve as vital tools to alleviate issues of misinformation, information overload, and complexity of medical language, thus addressing lay users' information needs while reducing the burden on healthcare professionals. QA systems, the engines of such assistants, have typically used either language models (LMs) or knowledge graphs (KG), though the approaches could be complementary. LM-based QA systems excel at understanding complex questions and providing well-formed answers, but are prone to factual mistakes. KG-based QA systems, which represent facts well, are mostly limited to answering short-answer questions with pre-created templates. While a few studies have jointly used LM and KG approaches for text-based QA, this was done to answer multiple-choice questions. Extant QA systems also have limitations in terms of automation and performance. We address these challenges by designing a novel, automated disease QA system which effectively utilizes both LM and KG techniques through a joint-reasoning approach to answer disease-related questions appropriate for lay users. Our evaluation of the system using a range of quality metrics demonstrates its efficacy over benchmark systems, including the popular ChatGPT.