# Dynamic Neural Fields for Learning Atlases of 4D Fetal MRI Time-series

arXiv: https://arxiv.org/abs/2311.02874 · HTML: https://mlsanity.com/paper/2311.02874/

## Key facts

- Cited by 4 papers in the map (data through 14 Oct 2026).
- Builds on 10 of its 32 references that are in the map.
- First posted on arXiv 6 Nov 2023.

## Builds on (most cited first, 10 of 10)

- [Instant Neural Graphics Primitives with a Multiresolution Hash Encoding](https://mlsanity.com/paper/2201.05989/) (2022)
- [D-NeRF: Neural Radiance Fields for Dynamic Scenes](https://mlsanity.com/paper/2011.13961/) (2020)
- [Nerfies: Deformable Neural Radiance Fields](https://mlsanity.com/paper/2011.12948/) (2020)
- [Non-Rigid Neural Radiance Fields: Reconstruction and Novel View Synthesis of a Dynamic Scene From Monocular Video](https://mlsanity.com/paper/2012.12247/) (2020)
- [NeRFPlayer: A Streamable Dynamic Scene Representation with Decomposed Neural Radiance Fields](https://mlsanity.com/paper/2210.15947/) (2022)
- [Large Deformation Diffeomorphic Image Registration with Laplacian Pyramid Networks](https://mlsanity.com/paper/2006.16148/) (2020)
- [Learning Conditional Deformable Templates with Convolutional Networks](https://mlsanity.com/paper/1908.02738/) (2019)
- [Generative Adversarial Registration for Improved Conditional Deformable Templates](https://mlsanity.com/paper/2105.04349/) (2021)
- [Aladdin: Joint Atlas Building and Diffeomorphic Registration Learning with Pairwise Alignment](https://mlsanity.com/paper/2202.03563/) (2022)
- [Automatic Segmentation of the Placenta in BOLD MRI Time Series](https://mlsanity.com/paper/2208.02895/) (2022)

## Built on by (most cited first, 4 of 4)

- [SE(3)-Equivariant and Noise-Invariant 3D Rigid Motion Tracking in Brain MRI](https://mlsanity.com/paper/2312.13534/) (2023)
- [MultiMorph: On-demand Atlas Construction](https://mlsanity.com/paper/2504.00247/) (2025)
- [Fetuses Made Simple: Modeling and Tracking of Fetal Shape and Pose](https://mlsanity.com/paper/2506.17858/) (2025)
- [Shape-aware Segmentation of the Placenta in BOLD Fetal MRI Time Series](https://mlsanity.com/paper/2312.05148/) (2023)

## Abstract (arXiv)

We present a method for fast biomedical image atlas construction using neural fields. Atlases are key to biomedical image analysis tasks, yet conventional and deep network estimation methods remain time-intensive. In this preliminary work, we frame subject-specific atlas building as learning a neural field of deformable spatiotemporal observations. We apply our method to learning subject-specific atlases and motion stabilization of dynamic BOLD MRI time-series of fetuses in utero. Our method yields high-quality atlases of fetal BOLD time-series with ~5-7× faster convergence compared to existing work. While our method slightly underperforms well-tuned baselines in terms of anatomical overlap, it estimates templates significantly faster, thus enabling rapid processing and stabilization of large databases of 4D dynamic MRI acquisitions. Code is available at https://github.com/Kidrauh/neural-atlasing