# Impact of translation on biomedical information extraction from real-life clinical notes

arXiv: https://arxiv.org/abs/2306.02042 · HTML: https://mlsanity.com/paper/2306.02042/

## Key facts

- Cited by 1 papers in the map (data through 14 Oct 2026).
- Builds on 15 of its 45 references that are in the map.
- First posted on arXiv 3 Jun 2023.

## Builds on (most cited first, 15 of 15)

- [Attention Is All You Need](https://mlsanity.com/paper/1706.03762/) (2017)
- [BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding](https://mlsanity.com/paper/1810.04805/) (2018)
- [Adam: A Method for Stochastic Optimization](https://mlsanity.com/paper/1412.6980/) (2014)
- [BioBERT: a pre-trained biomedical language representation model for biomedical text mining](https://mlsanity.com/paper/1901.08746/) (2019)
- [Enriching Word Vectors with Subword Information](https://mlsanity.com/paper/1607.04606/) (2016)
- [Neural Architectures for Named Entity Recognition](https://mlsanity.com/paper/1603.01360/) (2016)
- [ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission](https://mlsanity.com/paper/1904.05342/) (2019)
- [Multi-Similarity Loss with General Pair Weighting for Deep Metric Learning](https://mlsanity.com/paper/1904.06627/) (2019)
- [CamemBERT: a Tasty French Language Model](https://mlsanity.com/paper/1911.03894/) (2019)
- [FlauBERT: Unsupervised Language Model Pre-training for French](https://mlsanity.com/paper/1912.05372/) (2019)
- [Named Entity Recognition as Dependency Parsing](https://mlsanity.com/paper/2005.07150/) (2020)
- [CODER: Knowledge infused cross-lingual medical term embedding for term normalization](https://mlsanity.com/paper/2011.02947/) (2020)
- [Residual LSTM: Design of a Deep Recurrent Architecture for Distant Speech Recognition](https://mlsanity.com/paper/1701.03360/) (2017)
- [MedCAT -- Medical Concept Annotation Tool](https://mlsanity.com/paper/1912.10166/) (2019)
- [Biomedical term normalization of EHRs with UMLS](https://mlsanity.com/paper/1802.02870/) (2018)

## Built on by (most cited first, 1 of 1)

- [VM14K: First Vietnamese Medical Benchmark](https://mlsanity.com/paper/2506.01305/) (2025)

## Abstract (arXiv)

The objective of our study is to determine whether using English tools to extract and normalize French medical concepts on translations provides comparable performance to French models trained on a set of annotated French clinical notes. We compare two methods: a method involving French language models and a method involving English language models. For the native French method, the Named Entity Recognition (NER) and normalization steps are performed separately. For the translated English method, after the first translation step, we compare a two-step method and a terminology-oriented method that performs extraction and normalization at the same time. We used French, English and bilingual annotated datasets to evaluate all steps (NER, normalization and translation) of our algorithms. Concerning the results, the native French method performs better than the translated English one with a global f1 score of 0.51 [0.47;0.55] against 0.39 [0.34;0.44] and 0.38 [0.36;0.40] for the two English methods tested. In conclusion, despite the recent improvement of the translation models, there is a significant performance difference between the two approaches in favor of the native French method which is more efficient on French medical texts, even with few annotated documents.