# Evaluation of Multi-indicator And Multi-organ Medical Image Segmentation Models

arXiv: https://arxiv.org/abs/2306.00446 · HTML: https://mlsanity.com/paper/2306.00446/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 16 of its 26 references that are in the map.
- First posted on arXiv 1 Jun 2023.

## Builds on (most cited first, 16 of 16)

- [An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale](https://mlsanity.com/paper/2010.11929/) (2020)
- [U-Net: Convolutional Networks for Biomedical Image Segmentation](https://mlsanity.com/paper/1505.04597/) (2015)
- [Swin Transformer: Hierarchical Vision Transformer using Shifted Windows](https://mlsanity.com/paper/2103.14030/) (2021)
- [On Calibration of Modern Neural Networks](https://mlsanity.com/paper/1706.04599/) (2017)
- [Dropout as a Bayesian Approximation: Representing Model Uncertainty in Deep Learning](https://mlsanity.com/paper/1506.02142/) (2015)
- [V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation](https://mlsanity.com/paper/1606.04797/) (2016)
- [TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation](https://mlsanity.com/paper/2102.04306/) (2021)
- [3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation](https://mlsanity.com/paper/1606.06650/) (2016)
- [Attention U-Net: Learning Where to Look for the Pancreas](https://mlsanity.com/paper/1804.03999/) (2018)
- [Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation](https://mlsanity.com/paper/2105.05537/) (2021)
- [UNETR: Transformers for 3D Medical Image Segmentation](https://mlsanity.com/paper/2103.10504/) (2021)
- [Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Images](https://mlsanity.com/paper/2201.01266/) (2022)
- [A Simple Baseline for Bayesian Uncertainty in Deep Learning](https://mlsanity.com/paper/1902.02476/) (2019)
- [AMOS: A Large-Scale Abdominal Multi-Organ Benchmark for Versatile Medical Image Segmentation](https://mlsanity.com/paper/2206.08023/) (2022)
- [Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation](https://mlsanity.com/paper/1911.13273/) (2019)
- [Usable Region Estimate for Assessing Practical Usability of Medical Image Segmentation Models](https://mlsanity.com/paper/2207.00156/) (2022)

## Abstract (arXiv)

In recent years, "U-shaped" neural networks featuring encoder and decoder structures have gained popularity in the field of medical image segmentation. Various variants of this model have been developed. Nevertheless, the evaluation of these models has received less attention compared to model development. In response, we propose a comprehensive method for evaluating medical image segmentation models for multi-indicator and multi-organ (named MIMO). MIMO allows models to generate independent thresholds which are then combined with multi-indicator evaluation and confidence estimation to screen and measure each organ. As a result, MIMO offers detailed information on the segmentation of each organ in each sample, thereby aiding developers in analyzing and improving the model. Additionally, MIMO can produce concise usability and comprehensiveness scores for different models. Models with higher scores are deemed to be excellent models, which is convenient for clinical evaluation. Our research tests eight different medical image segmentation models on two abdominal multi-organ datasets and evaluates them from four perspectives: correctness, confidence estimation, Usable Region and MIMO. Furthermore, robustness experiments are tested. Experimental results demonstrate that MIMO offers novel insights into multi-indicator and multi-organ medical image evaluation and provides a specific and concise measure for the usability and comprehensiveness of the model. Code: https://github.com/SCUT-ML-GUO/MIMO