# Multi-task learning for tissue segmentation and tumor detection in colorectal cancer histology slides

arXiv: https://arxiv.org/abs/2304.03101 · HTML: https://mlsanity.com/paper/2304.03101/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 4 of its 8 references that are in the map.
- First posted on arXiv 6 Apr 2023.

## Builds on (most cited first, 4 of 4)

- [U-Net: Convolutional Networks for Biomedical Image Segmentation](https://mlsanity.com/paper/1505.04597/) (2015)
- [Quantifying the effects of data augmentation and stain color normalization in convolutional neural networks for computational pathology](https://mlsanity.com/paper/1902.06543/) (2019)
- [Mitosis domain generalization in histopathology images -- The MIDOG challenge](https://mlsanity.com/paper/2204.03742/) (2022)
- [Sk-Unet Model with Fourier Domain for Mitosis Detection](https://mlsanity.com/paper/2109.00957/) (2021)

## Abstract (arXiv)

Automating tissue segmentation and tumor detection in histopathology images of colorectal cancer (CRC) is an enabler for faster diagnostic pathology workflows. At the same time it is a challenging task due to low availability of public annotated datasets and high variability of image appearance. The semi-supervised learning for CRC detection (SemiCOL) challenge 2023 provides partially annotated data to encourage the development of automated solutions for tissue segmentation and tumor detection. We propose a U-Net based multi-task model combined with channel-wise and image-statistics-based color augmentations, as well as test-time augmentation, as a candidate solution to the SemiCOL challenge. Our approach achieved a multi-task Dice score of .8655 (Arm 1) and .8515 (Arm 2) for tissue segmentation and AUROC of .9725 (Arm 1) and 0.9750 (Arm 2) for tumor detection on the challenge validation set. The source code for our approach is made publicly available at https://github.com/lely475/CTPLab_SemiCOL2023.