# A Large-Scale Dataset for Biomedical Keyphrase Generation

arXiv: https://arxiv.org/abs/2211.12124 · HTML: https://mlsanity.com/paper/2211.12124/

## Key facts

- Cited by 6 papers in the map (data through 14 Oct 2026).
- Builds on 18 of its 35 references that are in the map.
- First posted on arXiv 22 Nov 2022.

## Builds on (most cited first, 18 of 18)

- [BART: Denoising Sequence-to-Sequence Pre-training for Natural Language Generation, Translation, and Comprehension](https://mlsanity.com/paper/1910.13461/) (2019)
- [Sequence to Sequence Learning with Neural Networks](https://mlsanity.com/paper/1409.3215/) (2014)
- [Document Expansion by Query Prediction](https://mlsanity.com/paper/1904.08375/) (2019)
- [SemEval 2017 Task 10: ScienceIE - Extracting Keyphrases and Relations from Scientific Publications](https://mlsanity.com/paper/1704.02853/) (2017)
- [Deep Keyphrase Generation](https://mlsanity.com/paper/1704.06879/) (2017)
- [BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model](https://mlsanity.com/paper/2204.03905/) (2022)
- [Unsupervised Keyphrase Extraction with Multipartite Graphs](https://mlsanity.com/paper/1803.08721/) (2018)
- [Keyphrase Generation with Correlation Constraints](https://mlsanity.com/paper/1808.07185/) (2018)
- [Neural Keyphrase Generation via Reinforcement Learning with Adaptive Rewards](https://mlsanity.com/paper/1906.04106/) (2019)
- [KPTimes: A Large-Scale Dataset for Keyphrase Generation on News Documents](https://mlsanity.com/paper/1911.12559/) (2019)
- [Semi-Supervised Learning for Neural Keyphrase Generation](https://mlsanity.com/paper/1808.06773/) (2018)
- [Title-Guided Encoding for Keyphrase Generation](https://mlsanity.com/paper/1808.08575/) (2018)
- [An Empirical Study on Neural Keyphrase Generation](https://mlsanity.com/paper/2009.10229/) (2020)
- [Select, Extract and Generate: Neural Keyphrase Generation with Layer-wise Coverage Attention](https://mlsanity.com/paper/2008.01739/) (2020)
- [Keyphrase Generation for Scientific Document Retrieval](https://mlsanity.com/paper/2106.14726/) (2021)
- [Applying a Generic Sequence-to-Sequence Model for Simple and Effective Keyphrase Generation](https://mlsanity.com/paper/2201.05302/) (2022)
- [LDKP: A Dataset for Identifying Keyphrases from Long Scientific Documents](https://mlsanity.com/paper/2203.15349/) (2022)
- [Redefining Absent Keyphrases and their Effect on Retrieval Effectiveness](https://mlsanity.com/paper/2103.12440/) (2021)

## Built on by (most cited first, 6 of 6)

- [ChatGPT vs State-of-the-Art Models: A Benchmarking Study in Keyphrase Generation Task](https://mlsanity.com/paper/2304.14177/) (2023)
- [Unsupervised Domain Adaptation for Keyphrase Generation using Citation Contexts](https://mlsanity.com/paper/2409.13266/) (2024)
- [Self-Compositional Data Augmentation for Scientific Keyphrase Generation](https://mlsanity.com/paper/2411.03039/) (2024)
- [MetaKP: On-Demand Keyphrase Generation](https://mlsanity.com/paper/2407.00191/) (2024)
- [An Analysis of Datasets, Metrics and Models in Keyphrase Generation](https://mlsanity.com/paper/2506.10346/) (2025)
- [Evaluating the Homogeneity of Keyphrase Prediction Models](https://mlsanity.com/paper/2602.12989/) (2026)

## Abstract (arXiv)

Keyphrase generation is the task consisting in generating a set of words or phrases that highlight the main topics of a document. There are few datasets for keyphrase generation in the biomedical domain and they do not meet the expectations in terms of size for training generative models. In this paper, we introduce kp-biomed, the first large-scale biomedical keyphrase generation dataset with more than 5M documents collected from PubMed abstracts. We train and release several generative models and conduct a series of experiments showing that using large scale datasets improves significantly the performances for present and absent keyphrase generation. The dataset is available under CC-BY-NC v4.0 license at https://huggingface.co/ datasets/taln-ls2n/kpbiomed.