# CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis

arXiv: https://arxiv.org/abs/2210.05440 · HTML: https://mlsanity.com/paper/2210.05440/

## Key facts

- Cited by 1 papers in the map (data through 14 Oct 2026).
- Builds on 9 of its 35 references that are in the map.
- First posted on arXiv 11 Oct 2022.

## Builds on (most cited first, 9 of 9)

- [UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction](https://mlsanity.com/paper/1802.03426/) (2018)
- [PadChest: A large chest x-ray image dataset with multi-label annotated reports](https://mlsanity.com/paper/1901.07441/) (2019)
- [COVID-Net: A Tailored Deep Convolutional Neural Network Design for Detection of COVID-19 Cases from Chest X-Ray Images](https://mlsanity.com/paper/2003.09871/) (2020)
- [Can AI help in screening Viral and COVID-19 pneumonia?](https://mlsanity.com/paper/2003.13145/) (2020)
- [Common pitfalls and recommendations for using machine learning to detect and prognosticate for COVID-19 using chest radiographs and CT scans](https://mlsanity.com/paper/2008.06388/) (2020)
- [BIMCV COVID-19+: a large annotated dataset of RX and CT images from COVID-19 patients](https://mlsanity.com/paper/2006.01174/) (2020)
- [Deep-COVID: Predicting COVID-19 From Chest X-Ray Images Using Deep Transfer Learning](https://mlsanity.com/paper/2004.09363/) (2020)
- [Extracting possibly representative COVID-19 Biomarkers from X-Ray images with Deep Learning approach and image data related to Pulmonary Diseases](https://mlsanity.com/paper/2004.00338/) (2020)
- [AIforCOVID: predicting the clinical outcomes in patients with COVID-19 applying AI to chest-X-rays. An Italian multicentre study](https://mlsanity.com/paper/2012.06531/) (2020)

## Built on by (most cited first, 1 of 1)

- [POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021)](https://mlsanity.com/paper/2211.16359/) (2022)

## Abstract (arXiv)

Due to the large accumulation of patients requiring hospitalization, the COVID-19 pandemic disease caused a high overload of health systems, even in developed countries. Deep learning techniques based on medical imaging data can help in the faster detection of COVID-19 cases and monitoring of disease progression. Regardless of the numerous proposed solutions for lung X-rays, none of them is a product that can be used in the clinic. Five different datasets (POLCOVID, AIforCOVID, COVIDx, NIH, and artificially generated data) were used to construct a representative dataset of 23 799 CXRs for model training; 1 050 images were used as a hold-out test set, and 44 247 as independent test set (BIMCV database). A U-Net-based model was developed to identify a clinically relevant region of the CXR. Each image class (normal, pneumonia, and COVID-19) was divided into 3 subtypes using a 2D Gaussian mixture model. A decision tree was used to aggregate predictions from the InceptionV3 network based on processed CXRs and a dense neural network on radiomic features. The lung segmentation model gave the Sorensen-Dice coefficient of 94.86% in the validation dataset, and 93.36% in the testing dataset. In 5-fold cross-validation, the accuracy for all classes ranged from 91% to 93%, keeping slightly higher specificity than sensitivity and NPV than PPV. In the hold-out test set, the balanced accuracy ranged between 68% and 100%. The highest performance was obtained for the subtypes N1, P1, and C1. A similar performance was obtained on the independent dataset for normal and COVID-19 class subtypes. Seventy-six percent of COVID-19 patients wrongly classified as normal cases were annotated by radiologists as with no signs of disease. Finally, we developed the online service (https://circa.aei.polsl.pl) to provide access to fast diagnosis support tools.