# Colonoscopy Landmark Detection using Vision Transformers

arXiv: https://arxiv.org/abs/2209.11304 · HTML: https://mlsanity.com/paper/2209.11304/

## Key facts

- Cited by 1 papers in the map (data through 14 Oct 2026).
- Builds on 13 of its 32 references that are in the map.
- First posted on arXiv 22 Sep 2022.

## Builds on (most cited first, 13 of 13)

- [Attention Is All You Need](https://mlsanity.com/paper/1706.03762/) (2017)
- [Deep Residual Learning for Image Recognition](https://mlsanity.com/paper/1512.03385/) (2015)
- [An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale](https://mlsanity.com/paper/2010.11929/) (2020)
- [Very Deep Convolutional Networks for Large-Scale Image Recognition](https://mlsanity.com/paper/1409.1556/) (2014)
- [A ConvNet for the 2020s](https://mlsanity.com/paper/2201.03545/) (2022)
- [UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction](https://mlsanity.com/paper/1802.03426/) (2018)
- [Sharpness-Aware Minimization for Efficiently Improving Generalization](https://mlsanity.com/paper/2010.01412/) (2020)
- [When Vision Transformers Outperform ResNets without Pre-training or Strong Data Augmentations](https://mlsanity.com/paper/2106.01548/) (2021)
- [A review of deep learning in medical imaging: Imaging traits, technology trends, case studies with progress highlights, and future promises](https://mlsanity.com/paper/2008.09104/) (2020)
- [Comparing Kullback-Leibler Divergence and Mean Squared Error Loss in Knowledge Distillation](https://mlsanity.com/paper/2105.08919/) (2021)
- [Automated polyp detection in colon capsule endoscopy](https://mlsanity.com/paper/1305.1912/) (2013)
- [Exploring Corruption Robustness: Inductive Biases in Vision Transformers and MLP-Mixers](https://mlsanity.com/paper/2106.13122/) (2021)
- [Deep Learning-based Biological Anatomical Landmark Detection in Colonoscopy Videos](https://mlsanity.com/paper/2108.02948/) (2021)

## Built on by (most cited first, 1 of 1)

- [Frontiers in Intelligent Colonoscopy](https://mlsanity.com/paper/2410.17241/) (2024)

## Abstract (arXiv)

Colonoscopy is a routine outpatient procedure used to examine the colon and rectum for any abnormalities including polyps, diverticula and narrowing of colon structures. A significant amount of the clinician's time is spent in post-processing snapshots taken during the colonoscopy procedure, for maintaining medical records or further investigation. Automating this step can save time and improve the efficiency of the process. In our work, we have collected a dataset of 120 colonoscopy videos and 2416 snapshots taken during the procedure, that have been annotated by experts. Further, we have developed a novel, vision-transformer based landmark detection algorithm that identifies key anatomical landmarks (the appendiceal orifice, ileocecal valve/cecum landmark and rectum retroflexion) from snapshots taken during colonoscopy. Our algorithm uses an adaptive gamma correction during preprocessing to maintain a consistent brightness for all images. We then use a vision transformer as the feature extraction backbone and a fully connected network based classifier head to categorize a given frame into four classes: the three landmarks or a non-landmark frame. We compare the vision transformer (ViT-B/16) backbone with ResNet-101 and ConvNext-B backbones that have been trained similarly. We report an accuracy of 82% with the vision transformer backbone on a test dataset of snapshots.