# Performing Video Frame Prediction of Microbial Growth with a Recurrent Neural Network

arXiv: https://arxiv.org/abs/2205.05810 · HTML: https://mlsanity.com/paper/2205.05810/

## Key facts

- No citing papers in the map yet (data through 14 Oct 2026).
- Builds on 7 of its 25 references that are in the map.
- First posted on arXiv 12 May 2022.

## Builds on (most cited first, 7 of 7)

- [The Unreasonable Effectiveness of Deep Features as a Perceptual Metric](https://mlsanity.com/paper/1801.03924/) (2018)
- [Convolutional LSTM Network: A Machine Learning Approach for Precipitation Nowcasting](https://mlsanity.com/paper/1506.04214/) (2015)
- [PredRNN: A Recurrent Neural Network for Spatiotemporal Predictive Learning](https://mlsanity.com/paper/2103.09504/) (2021)
- [A Review on Deep Learning Techniques for Video Prediction](https://mlsanity.com/paper/2004.05214/) (2020)
- [Convolutional Tensor-Train LSTM for Spatio-temporal Learning](https://mlsanity.com/paper/2002.09131/) (2020)
- [AtomAI: A Deep Learning Framework for Analysis of Image and Spectroscopy Data in (Scanning) Transmission Electron Microscopy and Beyond](https://mlsanity.com/paper/2105.07485/) (2021)
- [Generation of microbial colonies dataset with deep learning style transfer](https://mlsanity.com/paper/2111.03789/) (2021)

## Abstract (arXiv)

A Recurrent Neural Network (RNN) was used to perform video frame prediction of microbial growth for a population of two mutants of Pseudomonas aeruginosa. The RNN was trained on videos of 20 frames that were acquired using fluorescence microscopy and microfluidics. The network predicted the last 10 frames of each video, and the accuracy's of the predictions was assessed by comparing raw images, population curves, and the number and size of individual colonies. Overall, we found the predictions to be accurate using this approach. The implications this result has on designing autonomous experiments in microbiology, and the steps that can be taken to make the predictions even more accurate, are discussed.