# Unsupervised Network Embedding Beyond Homophily

arXiv: https://arxiv.org/abs/2203.10866 · HTML: https://mlsanity.com/paper/2203.10866/

## Key facts

- Cited by 7 papers in the map (data through 14 Oct 2026).
- Builds on 50 of its 71 references that are in the map.
- First posted on arXiv 21 Mar 2022.

## Builds on (most cited first, 30 of 50)

- [Semi-Supervised Classification with Graph Convolutional Networks](https://mlsanity.com/paper/1609.02907/) (2016)
- [Graph Attention Networks](https://mlsanity.com/paper/1710.10903/) (2017)
- [Inductive Representation Learning on Large Graphs](https://mlsanity.com/paper/1706.02216/) (2017)
- [How Powerful are Graph Neural Networks?](https://mlsanity.com/paper/1810.00826/) (2018)
- [Delving Deep into Rectifiers: Surpassing Human-Level Performance on ImageNet Classification](https://mlsanity.com/paper/1502.01852/) (2015)
- [Distributed Representations of Words and Phrases and their Compositionality](https://mlsanity.com/paper/1310.4546/) (2013)
- [A Comprehensive Survey on Graph Neural Networks](https://mlsanity.com/paper/1901.00596/) (2019)
- [Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering](https://mlsanity.com/paper/1606.09375/) (2016)
- [node2vec: Scalable Feature Learning for Networks](https://mlsanity.com/paper/1607.00653/) (2016)
- [Barlow Twins: Self-Supervised Learning via Redundancy Reduction](https://mlsanity.com/paper/2103.03230/) (2021)
- [DeepWalk: Online Learning of Social Representations](https://mlsanity.com/paper/1403.6652/) (2014)
- [Variational Graph Auto-Encoders](https://mlsanity.com/paper/1611.07308/) (2016)
- [Relational inductive biases, deep learning, and graph networks](https://mlsanity.com/paper/1806.01261/) (2018)
- [Graph Contrastive Learning with Augmentations](https://mlsanity.com/paper/2010.13902/) (2020)
- [Deep Graph Infomax](https://mlsanity.com/paper/1809.10341/) (2018)
- [Geom-GCN: Geometric Graph Convolutional Networks](https://mlsanity.com/paper/2002.05287/) (2020)
- [Deep Learning and the Information Bottleneck Principle](https://mlsanity.com/paper/1503.02406/) (2015)
- [Adaptive Universal Generalized PageRank Graph Neural Network](https://mlsanity.com/paper/2006.07988/) (2020)
- [LINE: Large-scale Information Network Embedding](https://mlsanity.com/paper/1503.03578/) (2015)
- [Multi-scale Attributed Node Embedding](https://mlsanity.com/paper/1909.13021/) (2019)
- [Measuring and Relieving the Over-smoothing Problem for Graph Neural Networks from the Topological View](https://mlsanity.com/paper/1909.03211/) (2019)
- [GCC: Graph Contrastive Coding for Graph Neural Network Pre-Training](https://mlsanity.com/paper/2006.09963/) (2020)
- [MixHop: Higher-Order Graph Convolutional Architectures via Sparsified Neighborhood Mixing](https://mlsanity.com/paper/1905.00067/) (2019)
- [Adversarial Attacks on Neural Networks for Graph Data](https://mlsanity.com/paper/1805.07984/) (2018)
- [Deep Learning on Graphs: A Survey](https://mlsanity.com/paper/1812.04202/) (2018)
- [Beyond Low-frequency Information in Graph Convolutional Networks](https://mlsanity.com/paper/2101.00797/) (2021)
- [Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methods](https://mlsanity.com/paper/2110.14446/) (2021)
- [MAGNN: Metapath Aggregated Graph Neural Network for Heterogeneous Graph Embedding](https://mlsanity.com/paper/2002.01680/) (2020)
- [Towards K-means-friendly Spaces: Simultaneous Deep Learning and Clustering](https://mlsanity.com/paper/1610.04794/) (2016)
- [Graph Representation Learning via Graphical Mutual Information Maximization](https://mlsanity.com/paper/2002.01169/) (2020)

## Built on by (most cited first, 7 of 7)

- [A Survey of Deep Graph Clustering: Taxonomy, Challenge, Application, and Open Resource](https://mlsanity.com/paper/2211.12875/) (2022)
- [Single-Pass Contrastive Learning Can Work for Both Homophilic and Heterophilic Graph](https://mlsanity.com/paper/2211.10890/) (2022)
- [Provable Filter for Real-world Graph Clustering](https://mlsanity.com/paper/2403.03666/) (2024)
- [Aggregation-aware MLP: An Unsupervised Approach for Graph Message-passing](https://mlsanity.com/paper/2507.20127/) (2025)
- [Attention Beyond Neighborhoods: Reviving Transformer for Graph Clustering](https://mlsanity.com/paper/2509.15024/) (2025)
- [Diffusion-Assisted Distillation for Self-Supervised Graph Representation Learning with MLPs](https://mlsanity.com/paper/2510.04241/) (2025)
- [Modeling Heterophily in Multiplex Graphs: An Adaptive Approach for Node Classification](https://mlsanity.com/paper/2605.12699/) (2026)

## Abstract (arXiv)

Network embedding (NE) approaches have emerged as a predominant technique to represent complex networks and have benefited numerous tasks. However, most NE approaches rely on a homophily assumption to learn embeddings with the guidance of supervisory signals, leaving the unsupervised heterophilous scenario relatively unexplored. This problem becomes especially relevant in fields where a scarcity of labels exists. Here, we formulate the unsupervised NE task as an r-ego network discrimination problem and develop the SELENE framework for learning on networks with homophily and heterophily. Specifically, we design a dual-channel feature embedding pipeline to discriminate r-ego networks using node attributes and structural information separately. We employ heterophily adapted self-supervised learning objective functions to optimise the framework to learn intrinsic node embeddings. We show that SELENE's components improve the quality of node embeddings, facilitating the discrimination of connected heterophilous nodes. Comprehensive empirical evaluations on both synthetic and real-world datasets with varying homophily ratios validate the effectiveness of SELENE in homophilous and heterophilous settings showing an up to 12.52% clustering accuracy gain.