# fastMRI+: Clinical Pathology Annotations for Knee and Brain Fully Sampled Multi-Coil MRI Data

arXiv: https://arxiv.org/abs/2109.03812 · HTML: https://mlsanity.com/paper/2109.03812/

## Key facts

- Cited by 29 papers in the map (data through 14 Oct 2026).
- Builds on 3 of its 14 references that are in the map.
- First posted on arXiv 8 Sep 2021.

## Builds on (most cited first, 3 of 3)

- [Learning a Variational Network for Reconstruction of Accelerated MRI Data](https://mlsanity.com/paper/1704.00447/) (2017)
- [Deep Learning Methods for Parallel Magnetic Resonance Image Reconstruction](https://mlsanity.com/paper/1904.01112/) (2019)
- [Advancing machine learning for MR image reconstruction with an open competition: Overview of the 2019 fastMRI challenge](https://mlsanity.com/paper/2001.02518/) (2020)

## Built on by (most cited first, 29 of 29)

- [Score-based diffusion models for accelerated MRI](https://mlsanity.com/paper/2110.05243/) (2021)
- [InverseBench: Benchmarking Plug-and-Play Diffusion Priors for Inverse Problems in Physical Sciences](https://mlsanity.com/paper/2503.11043/) (2025)
- [MR Image Denoising and Super-Resolution Using Regularized Reverse Diffusion](https://mlsanity.com/paper/2203.12621/) (2022)
- [Mask, Stitch, and Re-Sample: Enhancing Robustness and Generalizability in Anomaly Detection through Automatic Diffusion Models](https://mlsanity.com/paper/2305.19643/) (2023)
- [SKM-TEA: A Dataset for Accelerated MRI Reconstruction with Dense Image Labels for Quantitative Clinical Evaluation](https://mlsanity.com/paper/2203.06823/) (2022)
- [Correlated and Multi-frequency Diffusion Modeling for Highly Under-sampled MRI Reconstruction](https://mlsanity.com/paper/2309.00853/) (2023)
- [DMLR: Data-centric Machine Learning Research -- Past, Present and Future](https://mlsanity.com/paper/2311.13028/) (2023)
- [A Survey of Emerging Applications of Diffusion Probabilistic Models in MRI](https://mlsanity.com/paper/2311.11383/) (2023)
- [Jointly Modeling Inter- & Intra-Modality Dependencies for Multi-modal Learning](https://mlsanity.com/paper/2405.17613/) (2024)
- [Adaptive Sampling of k-Space in Magnetic Resonance for Rapid Pathology Prediction](https://mlsanity.com/paper/2406.04318/) (2024)
- [Validation and Generalizability of Self-Supervised Image Reconstruction Methods for Undersampled MRI](https://mlsanity.com/paper/2201.12535/) (2022)
- [Towards Universal Unsupervised Anomaly Detection in Medical Imaging](https://mlsanity.com/paper/2401.10637/) (2024)
- [End-to-End AI-based MRI Reconstruction and Lesion Detection Pipeline for Evaluation of Deep Learning Image Reconstruction](https://mlsanity.com/paper/2109.11524/) (2021)
- [NPB-REC: A Non-parametric Bayesian Deep-learning Approach for Undersampled MRI Reconstruction with Uncertainty Estimation](https://mlsanity.com/paper/2404.04550/) (2024)
- [Assessment of Data Consistency through Cascades of Independently Recurrent Inference Machines for fast and robust accelerated MRI reconstruction](https://mlsanity.com/paper/2111.15498/) (2021)
- [On the Feasibility of Machine Learning Augmented Magnetic Resonance for Point-of-Care Identification of Disease](https://mlsanity.com/paper/2301.11962/) (2023)
- [Denoising Diffusion Models for Anomaly Localization in Medical Images](https://mlsanity.com/paper/2410.23834/) (2024)
- [Image Quality Assessment for Magnetic Resonance Imaging](https://mlsanity.com/paper/2203.07809/) (2022)
- [Data and Physics Driven Learning Models for Fast MRI -- Fundamentals and Methodologies from CNN, GAN to Attention and Transformers](https://mlsanity.com/paper/2204.01706/) (2022)
- [A Densely Interconnected Network for Deep Learning Accelerated MRI](https://mlsanity.com/paper/2207.02073/) (2022)
- [Constrained Probabilistic Mask Learning for Task-specific Undersampled MRI Reconstruction](https://mlsanity.com/paper/2305.16376/) (2023)
- [The MRI Scanner as a Diagnostic: Image-less Active Sampling](https://mlsanity.com/paper/2406.16754/) (2024)
- [Sub-DM:Subspace Diffusion Model with Orthogonal Decomposition for MRI Reconstruction](https://mlsanity.com/paper/2411.03758/) (2024)
- [On Sensitivity and Robustness of Normalization Schemes to Input Distribution Shifts in Automatic MR Image Diagnosis](https://mlsanity.com/paper/2306.13276/) (2023)
- [Selective Test-Time Adaptation for Unsupervised Anomaly Detection using Neural Implicit Representations](https://mlsanity.com/paper/2410.03306/) (2024)
- [NPB-REC: Non-parametric Assessment of Uncertainty in Deep-learning-based MRI Reconstruction from Undersampled Data](https://mlsanity.com/paper/2208.03966/) (2022)
- [Adaptive Mask-guided K-space Diffusion for Accelerated MRI Reconstruction](https://mlsanity.com/paper/2506.18270/) (2025)
- [Vision-Language Model-Guided Deep Unrolling Enables Personalized, Fast MRI](https://mlsanity.com/paper/2604.06849/) (2026)
- [Information-Theoretic Optimization for Task-Adapted Compressed Sensing Magnetic Resonance Imaging](https://mlsanity.com/paper/2604.12709/) (2026)

## Abstract (arXiv)

Improving speed and image quality of Magnetic Resonance Imaging (MRI) via novel reconstruction approaches remains one of the highest impact applications for deep learning in medical imaging. The fastMRI dataset, unique in that it contains large volumes of raw MRI data, has enabled significant advances in accelerating MRI using deep learning-based reconstruction methods. While the impact of the fastMRI dataset on the field of medical imaging is unquestioned, the dataset currently lacks clinical expert pathology annotations, critical to addressing clinically relevant reconstruction frameworks and exploring important questions regarding rendering of specific pathology using such novel approaches. This work introduces fastMRI+, which consists of 16154 subspecialist expert bounding box annotations and 13 study-level labels for 22 different pathology categories on the fastMRI knee dataset, and 7570 subspecialist expert bounding box annotations and 643 study-level labels for 30 different pathology categories for the fastMRI brain dataset. The fastMRI+ dataset is open access and aims to support further research and advancement of medical imaging in MRI reconstruction and beyond.
