# Evaluating Modules in Graph Contrastive Learning

arXiv: https://arxiv.org/abs/2106.08171 · HTML: https://mlsanity.com/paper/2106.08171/

## Key facts

- Cited by 4 papers in the map (data through 14 Oct 2026).
- Builds on 34 of its 47 references that are in the map.
- First posted on arXiv 15 Jun 2021.

## Builds on (most cited first, 30 of 34)

- [BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding](https://mlsanity.com/paper/1810.04805/) (2018)
- [Adam: A Method for Stochastic Optimization](https://mlsanity.com/paper/1412.6980/) (2014)
- [A Simple Framework for Contrastive Learning of Visual Representations](https://mlsanity.com/paper/2002.05709/) (2020)
- [Semi-Supervised Classification with Graph Convolutional Networks](https://mlsanity.com/paper/1609.02907/) (2016)
- [Graph Attention Networks](https://mlsanity.com/paper/1710.10903/) (2017)
- [Representation Learning with Contrastive Predictive Coding](https://mlsanity.com/paper/1807.03748/) (2018)
- [Momentum Contrast for Unsupervised Visual Representation Learning](https://mlsanity.com/paper/1911.05722/) (2019)
- [How Powerful are Graph Neural Networks?](https://mlsanity.com/paper/1810.00826/) (2018)
- [Distributed Representations of Words and Phrases and their Compositionality](https://mlsanity.com/paper/1310.4546/) (2013)
- [Open Graph Benchmark: Datasets for Machine Learning on Graphs](https://mlsanity.com/paper/2005.00687/) (2020)
- [DeepWalk: Online Learning of Social Representations](https://mlsanity.com/paper/1403.6652/) (2014)
- [Variational Graph Auto-Encoders](https://mlsanity.com/paper/1611.07308/) (2016)
- [Learning deep representations by mutual information estimation and maximization](https://mlsanity.com/paper/1808.06670/) (2018)
- [Graph Contrastive Learning with Augmentations](https://mlsanity.com/paper/2010.13902/) (2020)
- [Deep Graph Infomax](https://mlsanity.com/paper/1809.10341/) (2018)
- [Pitfalls of Graph Neural Network Evaluation](https://mlsanity.com/paper/1811.05868/) (2018)
- [Representation Learning on Graphs with Jumping Knowledge Networks](https://mlsanity.com/paper/1806.03536/) (2018)
- [Image-based Recommendations on Styles and Substitutes](https://mlsanity.com/paper/1506.04757/) (2015)
- [Self-supervised Learning: Generative or Contrastive](https://mlsanity.com/paper/2006.08218/) (2020)
- [Benchmarking Graph Neural Networks](https://mlsanity.com/paper/2003.00982/) (2020)
- [Contrastive Multi-View Representation Learning on Graphs](https://mlsanity.com/paper/2006.05582/) (2020)
- [LINE: Large-scale Information Network Embedding](https://mlsanity.com/paper/1503.03578/) (2015)
- [Graph Contrastive Learning with Adaptive Augmentation](https://mlsanity.com/paper/2010.14945/) (2020)
- [f-GAN: Training Generative Neural Samplers using Variational Divergence Minimization](https://mlsanity.com/paper/1606.00709/) (2016)
- [Representation Learning on Graphs: Methods and Applications](https://mlsanity.com/paper/1709.05584/) (2017)
- [InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximization](https://mlsanity.com/paper/1908.01000/) (2019)
- [Graph Self-Supervised Learning: A Survey](https://mlsanity.com/paper/2103.00111/) (2021)
- [Wiki-CS: A Wikipedia-Based Benchmark for Graph Neural Networks](https://mlsanity.com/paper/2007.02901/) (2020)
- [A Fair Comparison of Graph Neural Networks for Graph Classification](https://mlsanity.com/paper/1912.09893/) (2019)
- [Network Embedding as Matrix Factorization: Unifying DeepWalk, LINE, PTE, and node2vec](https://mlsanity.com/paper/1710.02971/) (2017)

## Built on by (most cited first, 4 of 4)

- [Self-supervised Heterogeneous Graph Pre-training Based on Structural Clustering](https://mlsanity.com/paper/2210.10462/) (2022)
- [Pseudo Contrastive Learning for Graph-based Semi-supervised Learning](https://mlsanity.com/paper/2302.09532/) (2023)
- [Khan-GCL: Kolmogorov-Arnold Network Based Graph Contrastive Learning with Hard Negatives](https://mlsanity.com/paper/2505.15103/) (2025)
- [Unsupervised Entity Alignment Based on Personalized Discriminative Rooted Tree](https://mlsanity.com/paper/2502.10044/) (2025)

## Abstract (arXiv)

The recent emergence of contrastive learning approaches facilitates the application on graph representation learning (GRL), introducing graph contrastive learning (GCL) into the literature. These methods contrast semantically similar and dissimilar sample pairs to encode the semantics into node or graph embeddings. However, most existing works only performed model-level evaluation, and did not explore the combination space of modules for more comprehensive and systematic studies. For effective module-level evaluation, we propose a framework that decomposes GCL models into four modules: (1) a sampler to generate anchor, positive and negative data samples (nodes or graphs); (2) an encoder and a readout function to get sample embeddings; (3) a discriminator to score each sample pair (anchor-positive and anchor-negative); and (4) an estimator to define the loss function. Based on this framework, we conduct controlled experiments over a wide range of architectural designs and hyperparameter settings on node and graph classification tasks. Specifically, we manage to quantify the impact of a single module, investigate the interaction between modules, and compare the overall performance with current model architectures. Our key findings include a set of module-level guidelines for GCL, e.g., simple samplers from LINE and DeepWalk are strong and robust; an MLP encoder associated with Sum readout could achieve competitive performance on graph classification. Finally, we release our implementations and results as OpenGCL, a modularized toolkit that allows convenient reproduction, standard model and module evaluation, and easy extension. OpenGCL is available at urlhttps://github.com/thunlp/OpenGCL.