# Transformation Consistent Self-ensembling Model for Semi-supervised Medical Image Segmentation

arXiv: https://arxiv.org/abs/1903.00348 · HTML: https://mlsanity.com/paper/1903.00348/

## Key facts

- Cited by 140 papers in the map (data through 14 Oct 2026).
- First posted on arXiv 28 Feb 2019.

## Built on by (most cited first, 30 of 140)

- [Semantic Segmentation with Generative Models: Semi-Supervised Learning and Strong Out-of-Domain Generalization](https://mlsanity.com/paper/2104.05833/) (2021)
- [Recent advances and clinical applications of deep learning in medical image analysis](https://mlsanity.com/paper/2105.13381/) (2021)
- [Semi-Supervised Medical Image Segmentation via Cross Teaching between CNN and Transformer](https://mlsanity.com/paper/2112.04894/) (2021)
- [Exploring Smoothness and Class-Separation for Semi-supervised Medical Image Segmentation](https://mlsanity.com/paper/2203.01324/) (2022)
- [Ambiguous Medical Image Segmentation using Diffusion Models](https://mlsanity.com/paper/2304.04745/) (2023)
- [SimCVD: Simple Contrastive Voxel-Wise Representation Distillation for Semi-Supervised Medical Image Segmentation](https://mlsanity.com/paper/2108.06227/) (2021)
- [Learning with Limited Annotations: A Survey on Deep Semi-Supervised Learning for Medical Image Segmentation](https://mlsanity.com/paper/2207.14191/) (2022)
- [Inconsistency-aware Uncertainty Estimation for Semi-supervised Medical Image Segmentation](https://mlsanity.com/paper/2110.08762/) (2021)
- [Semi-supervised Contrastive Learning for Label-efficient Medical Image Segmentation](https://mlsanity.com/paper/2109.07407/) (2021)
- [Enhancing Pseudo Label Quality for Semi-Supervised Domain-Generalized Medical Image Segmentation](https://mlsanity.com/paper/2201.08657/) (2022)
- [Data-Uncertainty Guided Multi-Phase Learning for Semi-Supervised Object Detection](https://mlsanity.com/paper/2103.16368/) (2021)
- [Local contrastive loss with pseudo-label based self-training for semi-supervised medical image segmentation](https://mlsanity.com/paper/2112.09645/) (2021)
- [Self-supervised driven consistency training for annotation efficient histopathology image analysis](https://mlsanity.com/paper/2102.03897/) (2021)
- [A review of uncertainty quantification in medical image analysis: probabilistic and non-probabilistic methods](https://mlsanity.com/paper/2310.06873/) (2023)
- [Towards Generic Semi-Supervised Framework for Volumetric Medical Image Segmentation](https://mlsanity.com/paper/2310.11320/) (2023)
- [RSCFed: Random Sampling Consensus Federated Semi-supervised Learning](https://mlsanity.com/paper/2203.13993/) (2022)
- [Mine yOur owN Anatomy: Revisiting Medical Image Segmentation with Extremely Limited Labels](https://mlsanity.com/paper/2209.13476/) (2022)
- [Adaptive Bidirectional Displacement for Semi-Supervised Medical Image Segmentation](https://mlsanity.com/paper/2405.00378/) (2024)
- [Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation](https://mlsanity.com/paper/2112.07431/) (2021)
- [Min-Max Similarity: A Contrastive Semi-Supervised Deep Learning Network for Surgical Tools Segmentation](https://mlsanity.com/paper/2203.15177/) (2022)
- [Calibrating Label Distribution for Class-Imbalanced Barely-Supervised Knee Segmentation](https://mlsanity.com/paper/2205.03644/) (2022)
- [LE-UDA: Label-efficient unsupervised domain adaptation for medical image segmentation](https://mlsanity.com/paper/2212.02078/) (2022)
- [All-Around Real Label Supervision: Cyclic Prototype Consistency Learning for Semi-supervised Medical Image Segmentation](https://mlsanity.com/paper/2109.13930/) (2021)
- [Co-training with High-Confidence Pseudo Labels for Semi-supervised Medical Image Segmentation](https://mlsanity.com/paper/2301.04465/) (2023)
- [MT-UDA: Towards Unsupervised Cross-modality Medical Image Segmentation with Limited Source Labels](https://mlsanity.com/paper/2203.12454/) (2022)
- [FedMix: Mixed Supervised Federated Learning for Medical Image Segmentation](https://mlsanity.com/paper/2205.01840/) (2022)
- [Medical Image Segmentation with Limited Supervision: A Review of Deep Network Models](https://mlsanity.com/paper/2103.00429/) (2021)
- [Dual-Consistency Semi-Supervised Learning with Uncertainty Quantification for COVID-19 Lesion Segmentation from CT Images](https://mlsanity.com/paper/2104.03225/) (2021)
- [Uncertainty-Guided Mutual Consistency Learning for Semi-Supervised Medical Image Segmentation](https://mlsanity.com/paper/2112.02508/) (2021)
- [A Survey on Deep Learning for Skin Lesion Segmentation](https://mlsanity.com/paper/2206.00356/) (2022)

## Abstract (arXiv)

Deep convolutional neural networks have achieved remarkable progress on a variety of medical image computing tasks. A common problem when applying supervised deep learning methods to medical images is the lack of labeled data, which is very expensive and time-consuming to be collected. In this paper, we present a novel semi-supervised method for medical image segmentation, where the network is optimized by the weighted combination of a common supervised loss for labeled inputs only and a regularization loss for both labeled and unlabeled data. To utilize the unlabeled data, our method encourages the consistent predictions of the network-in-training for the same input under different regularizations. Aiming for the semi-supervised segmentation problem, we enhance the effect of regularization for pixel-level predictions by introducing a transformation, including rotation and flipping, consistent scheme in our self-ensembling model. With the aim of semi-supervised segmentation tasks, we introduce a transformation consistent strategy in our self-ensembling model to enhance the regularization effect for pixel-level predictions. We have extensively validated the proposed semi-supervised method on three typical yet challenging medical image segmentation tasks: (i) skin lesion segmentation from dermoscopy images on International Skin Imaging Collaboration (ISIC) 2017 dataset, (ii) optic disc segmentation from fundus images on Retinal Fundus Glaucoma Challenge (REFUGE) dataset, and (iii) liver segmentation from volumetric CT scans on Liver Tumor Segmentation Challenge (LiTS) dataset. Compared to the state-of-the-arts, our proposed method shows superior segmentation performance on challenging 2D/3D medical images, demonstrating the effectiveness of our semi-supervised method for medical image segmentation.